Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
IFNA1P01562 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC12.04□□□□□ -0.48
IFNA1P01562 SRGAP3-202ENST00000383836 8656 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
IFNA1P01562 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
IFNA1P01562 GOLGA2P9-201ENST00000596977 1937 ntBASIC12.04□□□□□ -0.48
IFNA1P01562 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC12.04□□□□□ -0.48
IFNA1P01562 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
IFNA1P01562 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC12.04□□□□□ -0.48
IFNA1P01562 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
IFNA1P01562 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
IFNA1P01562 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
IFNA1P01562 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC12.04□□□□□ -0.48
IFNA1P01562 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC12.04□□□□□ -0.48
IFNA1P01562 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC12.04□□□□□ -0.48
IFNA1P01562 AP000867.3-201ENST00000524675 377 ntBASIC12.04□□□□□ -0.48
IFNA1P01562 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC12.04□□□□□ -0.48
IFNA1P01562 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC12.04□□□□□ -0.48
IFNA1P01562 AC008667.4-201ENST00000607370 168 ntBASIC12.04□□□□□ -0.48
IFNA1P01562 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC12.04□□□□□ -0.48
IFNA1P01562 AC133561.5-201ENST00000635547 218 ntBASIC12.04□□□□□ -0.48
IFNA1P01562 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
IFNA1P01562 EPB41L5-205ENST00000452780 6410 ntTSL 5 BASIC12.04□□□□□ -0.48
IFNA1P01562 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
IFNA1P01562 PLEKHG2-203ENST00000425673 8132 ntAPPRIS P2 TSL 2 BASIC12.04□□□□□ -0.48
IFNA1P01562 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
IFNA1P01562 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
IFNA1P01562 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
IFNA1P01562 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
IFNA1P01562 ADCY7-201ENST00000254235 6138 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
IFNA1P01562 ARAP3-207ENST00000626478 4928 ntTSL 5 BASIC12.04□□□□□ -0.48
IFNA1P01562 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
IFNA1P01562 TP73-207ENST00000378290 1831 ntTSL 2 BASIC12.04□□□□□ -0.48
IFNA1P01562 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
IFNA1P01562 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
IFNA1P01562 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
IFNA1P01562 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
IFNA1P01562 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
IFNA1P01562 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
IFNA1P01562 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
IFNA1P01562 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
IFNA1P01562 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC12.04□□□□□ -0.48
IFNA1P01562 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
IFNA1P01562 BIVM-ERCC5-205ENST00000639435 5632 ntAPPRIS P5 TSL 5 BASIC12.04□□□□□ -0.48
IFNA1P01562 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC12.04□□□□□ -0.48
IFNA1P01562 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
IFNA1P01562 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
IFNA1P01562 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
IFNA1P01562 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
IFNA1P01562 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
IFNA1P01562 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
IFNA1P01562 AKNA-202ENST00000307564 7380 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
IFNA1P01562 GFRA1-204ENST00000439649 9216 ntAPPRIS P3 TSL 2 BASIC12.03□□□□□ -0.48
IFNA1P01562 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
IFNA1P01562 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
IFNA1P01562 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
IFNA1P01562 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC12.03□□□□□ -0.48
IFNA1P01562 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
IFNA1P01562 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
IFNA1P01562 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
IFNA1P01562 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
IFNA1P01562 WNK1-202ENST00000340908 11208 ntTSL 5 BASIC12.03□□□□□ -0.48
IFNA1P01562 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
IFNA1P01562 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC12.03□□□□□ -0.48
IFNA1P01562 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
IFNA1P01562 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC12.03□□□□□ -0.48
IFNA1P01562 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC12.03□□□□□ -0.48
IFNA1P01562 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC12.03□□□□□ -0.48
IFNA1P01562 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
IFNA1P01562 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
IFNA1P01562 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
IFNA1P01562 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
IFNA1P01562 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC12.03□□□□□ -0.48
IFNA1P01562 HS3ST1-201ENST00000002596 8031 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
IFNA1P01562 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
IFNA1P01562 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
IFNA1P01562 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC12.03□□□□□ -0.48
IFNA1P01562 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
IFNA1P01562 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
IFNA1P01562 FAM185BP-201ENST00000443595 716 ntBASIC12.03□□□□□ -0.48
IFNA1P01562 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
IFNA1P01562 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
IFNA1P01562 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC12.03□□□□□ -0.48
IFNA1P01562 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC12.03□□□□□ -0.48
IFNA1P01562 AC022616.7-201ENST00000525383 220 ntBASIC12.03□□□□□ -0.48
IFNA1P01562 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC12.03□□□□□ -0.48
IFNA1P01562 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC12.03□□□□□ -0.48
IFNA1P01562 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC12.03□□□□□ -0.48
IFNA1P01562 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC12.03□□□□□ -0.48
IFNA1P01562 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC12.03□□□□□ -0.48
IFNA1P01562 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC12.03□□□□□ -0.48
IFNA1P01562 MTDHP3-201ENST00000594186 672 ntBASIC12.03□□□□□ -0.48
IFNA1P01562 ACTL9-202ENST00000612068 1252 ntBASIC12.03□□□□□ -0.48
IFNA1P01562 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
IFNA1P01562 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
IFNA1P01562 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
IFNA1P01562 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
IFNA1P01562 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
IFNA1P01562 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
IFNA1P01562 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC12.03□□□□□ -0.48
IFNA1P01562 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms