Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCNKO75909 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC13.18□□□□□ -0.3
CCNKO75909 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCNKO75909 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCNKO75909 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
CCNKO75909 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCNKO75909 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCNKO75909 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCNKO75909 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCNKO75909 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CCNKO75909 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
CCNKO75909 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCNKO75909 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC13.18□□□□□ -0.3
CCNKO75909 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CCNKO75909 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCNKO75909 CSPG4P11-201ENST00000560634 4910 ntBASIC13.17□□□□□ -0.3
CCNKO75909 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCNKO75909 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCNKO75909 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC13.17□□□□□ -0.3
CCNKO75909 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CCNKO75909 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.17□□□□□ -0.3
CCNKO75909 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CCNKO75909 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.17□□□□□ -0.3
CCNKO75909 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC13.17□□□□□ -0.3
CCNKO75909 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC13.17□□□□□ -0.3
CCNKO75909 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC13.17□□□□□ -0.3
CCNKO75909 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
CCNKO75909 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCNKO75909 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCNKO75909 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCNKO75909 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCNKO75909 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
CCNKO75909 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCNKO75909 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13.17□□□□□ -0.3
CCNKO75909 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC13.17□□□□□ -0.3
CCNKO75909 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC13.17□□□□□ -0.3
CCNKO75909 ABCD1P5-201ENST00000445663 754 ntBASIC13.17□□□□□ -0.3
CCNKO75909 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC13.17□□□□□ -0.3
CCNKO75909 TOB2P1-201ENST00000469761 992 ntBASIC13.17□□□□□ -0.3
CCNKO75909 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC13.17□□□□□ -0.3
CCNKO75909 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC13.17□□□□□ -0.3
CCNKO75909 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC13.17□□□□□ -0.3
CCNKO75909 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
CCNKO75909 TPSP2-201ENST00000561760 610 ntBASIC13.17□□□□□ -0.3
CCNKO75909 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC13.17□□□□□ -0.3
CCNKO75909 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC13.17□□□□□ -0.3
CCNKO75909 AC010331.1-201ENST00000611423 582 ntBASIC13.17□□□□□ -0.3
CCNKO75909 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC13.17□□□□□ -0.3
CCNKO75909 AC022497.1-201ENST00000624916 3691 ntBASIC13.17□□□□□ -0.3
CCNKO75909 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCNKO75909 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.17□□□□□ -0.3
CCNKO75909 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC13.17□□□□□ -0.3
CCNKO75909 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
CCNKO75909 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
CCNKO75909 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCNKO75909 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC13.17□□□□□ -0.3
CCNKO75909 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.17□□□□□ -0.3
CCNKO75909 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CCNKO75909 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCNKO75909 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCNKO75909 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.16□□□□□ -0.3
CCNKO75909 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CCNKO75909 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCNKO75909 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCNKO75909 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CCNKO75909 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CCNKO75909 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCNKO75909 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCNKO75909 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CCNKO75909 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCNKO75909 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
CCNKO75909 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC13.16□□□□□ -0.3
CCNKO75909 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC13.16□□□□□ -0.3
CCNKO75909 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCNKO75909 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCNKO75909 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCNKO75909 NCF1C-201ENST00000438382 1427 ntBASIC13.16□□□□□ -0.3
CCNKO75909 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCNKO75909 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
CCNKO75909 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CCNKO75909 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCNKO75909 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCNKO75909 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCNKO75909 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCNKO75909 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCNKO75909 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC13.16□□□□□ -0.3
CCNKO75909 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCNKO75909 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCNKO75909 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
CCNKO75909 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.16□□□□□ -0.3
CCNKO75909 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC13.16□□□□□ -0.3
CCNKO75909 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC13.16□□□□□ -0.3
CCNKO75909 IGHV3-47-201ENST00000425060 335 ntBASIC13.16□□□□□ -0.3
CCNKO75909 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CCNKO75909 PAWRP1-201ENST00000451083 565 ntBASIC13.16□□□□□ -0.3
CCNKO75909 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC13.16□□□□□ -0.3
CCNKO75909 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC13.16□□□□□ -0.3
CCNKO75909 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC13.16□□□□□ -0.3
CCNKO75909 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
CCNKO75909 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms