Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTNND1O60716 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTNND1O60716 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC17.59■□□□□ 0.41
CTNND1O60716 SERF2-209ENST00000409646 559 ntTSL 4 BASIC17.59■□□□□ 0.41
CTNND1O60716 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CTNND1O60716 AC006335.1-201ENST00000445200 547 ntBASIC17.59■□□□□ 0.41
CTNND1O60716 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CTNND1O60716 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC17.59■□□□□ 0.41
CTNND1O60716 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC17.59■□□□□ 0.41
CTNND1O60716 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC17.59■□□□□ 0.41
CTNND1O60716 SNORD3B-2-202ENST00000571722 791 ntBASIC17.59■□□□□ 0.41
CTNND1O60716 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CTNND1O60716 MIR4706-201ENST00000582134 82 ntBASIC17.59■□□□□ 0.41
CTNND1O60716 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CTNND1O60716 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CTNND1O60716 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC17.59■□□□□ 0.41
CTNND1O60716 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTNND1O60716 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTNND1O60716 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.59■□□□□ 0.41
CTNND1O60716 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.59■□□□□ 0.41
CTNND1O60716 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTNND1O60716 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTNND1O60716 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTNND1O60716 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CTNND1O60716 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
CTNND1O60716 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CTNND1O60716 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CTNND1O60716 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CTNND1O60716 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CTNND1O60716 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
CTNND1O60716 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CTNND1O60716 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CTNND1O60716 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
CTNND1O60716 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.58■□□□□ 0.41
CTNND1O60716 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CTNND1O60716 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.58■□□□□ 0.41
CTNND1O60716 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CTNND1O60716 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CTNND1O60716 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CTNND1O60716 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CTNND1O60716 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CTNND1O60716 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CTNND1O60716 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC17.58■□□□□ 0.4
CTNND1O60716 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CTNND1O60716 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CTNND1O60716 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC17.58■□□□□ 0.4
CTNND1O60716 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC17.58■□□□□ 0.4
CTNND1O60716 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
CTNND1O60716 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC17.58■□□□□ 0.4
CTNND1O60716 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
CTNND1O60716 AP000346.4-201ENST00000614827 381 ntBASIC17.58■□□□□ 0.4
CTNND1O60716 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
CTNND1O60716 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CTNND1O60716 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
CTNND1O60716 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CTNND1O60716 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CTNND1O60716 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CTNND1O60716 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CTNND1O60716 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.58■□□□□ 0.4
CTNND1O60716 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CTNND1O60716 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CTNND1O60716 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CTNND1O60716 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CTNND1O60716 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CTNND1O60716 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTNND1O60716 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTNND1O60716 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CTNND1O60716 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CTNND1O60716 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CTNND1O60716 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTNND1O60716 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CTNND1O60716 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CTNND1O60716 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTNND1O60716 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTNND1O60716 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTNND1O60716 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTNND1O60716 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
CTNND1O60716 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CTNND1O60716 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTNND1O60716 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTNND1O60716 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CTNND1O60716 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CTNND1O60716 AC007274.2-201ENST00000421675 662 ntBASIC17.57■□□□□ 0.4
CTNND1O60716 CMC1-204ENST00000423894 549 ntTSL 2 BASIC17.57■□□□□ 0.4
CTNND1O60716 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC17.57■□□□□ 0.4
CTNND1O60716 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC17.57■□□□□ 0.4
CTNND1O60716 MPRIPP1-201ENST00000452433 1089 ntBASIC17.57■□□□□ 0.4
CTNND1O60716 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC17.57■□□□□ 0.4
CTNND1O60716 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC17.57■□□□□ 0.4
CTNND1O60716 AL160314.3-201ENST00000556041 767 ntBASIC17.57■□□□□ 0.4
CTNND1O60716 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC17.57■□□□□ 0.4
CTNND1O60716 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTNND1O60716 AC132192.2-201ENST00000596206 1147 ntBASIC17.57■□□□□ 0.4
CTNND1O60716 AL132994.2-201ENST00000603120 687 ntBASIC17.57■□□□□ 0.4
CTNND1O60716 AF254983.2-201ENST00000612331 135 ntBASIC17.57■□□□□ 0.4
CTNND1O60716 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTNND1O60716 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CTNND1O60716 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC17.57■□□□□ 0.4
CTNND1O60716 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CTNND1O60716 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms