Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 AC232323.1-201ENST00000540724 2099 ntBASIC18.67■□□□□ 0.58
SMARCA5O60264 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC18.67■□□□□ 0.58
SMARCA5O60264 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMARCA5O60264 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMARCA5O60264 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMARCA5O60264 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
SMARCA5O60264 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMARCA5O60264 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMARCA5O60264 RPS15-201ENST00000233609 534 ntTSL 2 BASIC18.67■□□□□ 0.58
SMARCA5O60264 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMARCA5O60264 AC098614.1-201ENST00000368528 745 ntBASIC18.67■□□□□ 0.58
SMARCA5O60264 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMARCA5O60264 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SMARCA5O60264 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SMARCA5O60264 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMARCA5O60264 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMARCA5O60264 ACTBP8-201ENST00000403258 1108 ntBASIC18.67■□□□□ 0.58
SMARCA5O60264 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
SMARCA5O60264 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC18.67■□□□□ 0.58
SMARCA5O60264 BAATP1-201ENST00000412284 1225 ntBASIC18.67■□□□□ 0.58
SMARCA5O60264 COX5BP8-201ENST00000416911 349 ntBASIC18.67■□□□□ 0.58
SMARCA5O60264 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMARCA5O60264 COX20P2-201ENST00000452636 358 ntBASIC18.67■□□□□ 0.58
SMARCA5O60264 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SMARCA5O60264 RPS15-205ENST00000586686 562 ntTSL 5 BASIC18.67■□□□□ 0.58
SMARCA5O60264 RPS15-208ENST00000591804 711 ntTSL 5 BASIC18.67■□□□□ 0.58
SMARCA5O60264 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMARCA5O60264 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC18.67■□□□□ 0.58
SMARCA5O60264 AC145423.3-201ENST00000615987 467 ntBASIC18.67■□□□□ 0.58
SMARCA5O60264 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SMARCA5O60264 LRRC59-203ENST00000576448 1531 ntBASIC18.67■□□□□ 0.58
SMARCA5O60264 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMARCA5O60264 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
SMARCA5O60264 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMARCA5O60264 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMARCA5O60264 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC18.67■□□□□ 0.58
SMARCA5O60264 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC18.67■□□□□ 0.58
SMARCA5O60264 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMARCA5O60264 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SMARCA5O60264 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC18.67■□□□□ 0.58
SMARCA5O60264 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMARCA5O60264 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC18.67■□□□□ 0.58
SMARCA5O60264 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMARCA5O60264 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
SMARCA5O60264 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SMARCA5O60264 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC18.67■□□□□ 0.58
SMARCA5O60264 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMARCA5O60264 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMARCA5O60264 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMARCA5O60264 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMARCA5O60264 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMARCA5O60264 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMARCA5O60264 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SMARCA5O60264 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
SMARCA5O60264 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SMARCA5O60264 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMARCA5O60264 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SMARCA5O60264 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMARCA5O60264 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMARCA5O60264 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SMARCA5O60264 APOA1-205ENST00000375329 927 ntTSL 2 BASIC18.66■□□□□ 0.58
SMARCA5O60264 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC18.66■□□□□ 0.58
SMARCA5O60264 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC18.66■□□□□ 0.58
SMARCA5O60264 AC012441.1-201ENST00000446669 685 ntBASIC18.66■□□□□ 0.58
SMARCA5O60264 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC18.66■□□□□ 0.58
SMARCA5O60264 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMARCA5O60264 AP001889.1-201ENST00000525414 633 ntBASIC18.66■□□□□ 0.58
SMARCA5O60264 AC068587.3-201ENST00000526613 355 ntBASIC18.66■□□□□ 0.58
SMARCA5O60264 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC18.66■□□□□ 0.58
SMARCA5O60264 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC18.66■□□□□ 0.58
SMARCA5O60264 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMARCA5O60264 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMARCA5O60264 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC18.66■□□□□ 0.58
SMARCA5O60264 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC18.66■□□□□ 0.58
SMARCA5O60264 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SMARCA5O60264 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMARCA5O60264 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMARCA5O60264 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SMARCA5O60264 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
SMARCA5O60264 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMARCA5O60264 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC18.65■□□□□ 0.58
SMARCA5O60264 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SMARCA5O60264 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMARCA5O60264 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SMARCA5O60264 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC18.65■□□□□ 0.58
SMARCA5O60264 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SMARCA5O60264 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMARCA5O60264 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMARCA5O60264 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC18.65■□□□□ 0.58
SMARCA5O60264 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SMARCA5O60264 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SMARCA5O60264 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC18.65■□□□□ 0.58
SMARCA5O60264 PGGT1BP2-201ENST00000398621 1028 ntBASIC18.65■□□□□ 0.58
SMARCA5O60264 RPL28-203ENST00000428193 573 ntTSL 2 BASIC18.65■□□□□ 0.58
SMARCA5O60264 RPL28-204ENST00000431533 590 ntTSL 2 BASIC18.65■□□□□ 0.58
SMARCA5O60264 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC18.65■□□□□ 0.58
SMARCA5O60264 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SMARCA5O60264 USP32P1-208ENST00000506594 1164 ntBASIC18.65■□□□□ 0.58
SMARCA5O60264 RPL28-207ENST00000558815 616 ntTSL 2 BASIC18.65■□□□□ 0.58
SMARCA5O60264 RPS15-202ENST00000585665 467 ntTSL 3 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms