Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDLIM1O00151 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.54□□□□□ -0.08
PDLIM1O00151 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PDLIM1O00151 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.54□□□□□ -0.08
PDLIM1O00151 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
PDLIM1O00151 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDLIM1O00151 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDLIM1O00151 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PDLIM1O00151 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.54□□□□□ -0.08
PDLIM1O00151 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.54□□□□□ -0.08
PDLIM1O00151 AC069335.1-201ENST00000489972 472 ntBASIC14.54□□□□□ -0.08
PDLIM1O00151 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.54□□□□□ -0.08
PDLIM1O00151 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.54□□□□□ -0.08
PDLIM1O00151 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.54□□□□□ -0.08
PDLIM1O00151 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.54□□□□□ -0.08
PDLIM1O00151 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.54□□□□□ -0.08
PDLIM1O00151 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.54□□□□□ -0.08
PDLIM1O00151 AC073389.1-201ENST00000595595 795 ntBASIC14.54□□□□□ -0.08
PDLIM1O00151 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.54□□□□□ -0.08
PDLIM1O00151 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.54□□□□□ -0.08
PDLIM1O00151 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.54□□□□□ -0.08
PDLIM1O00151 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.54□□□□□ -0.08
PDLIM1O00151 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PDLIM1O00151 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDLIM1O00151 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
PDLIM1O00151 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.54□□□□□ -0.08
PDLIM1O00151 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
PDLIM1O00151 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.54□□□□□ -0.08
PDLIM1O00151 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDLIM1O00151 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
PDLIM1O00151 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PDLIM1O00151 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PDLIM1O00151 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDLIM1O00151 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
PDLIM1O00151 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDLIM1O00151 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.53□□□□□ -0.08
PDLIM1O00151 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
PDLIM1O00151 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PDLIM1O00151 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PDLIM1O00151 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PDLIM1O00151 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
PDLIM1O00151 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PDLIM1O00151 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDLIM1O00151 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDLIM1O00151 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
PDLIM1O00151 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.53□□□□□ -0.08
PDLIM1O00151 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PDLIM1O00151 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PDLIM1O00151 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
PDLIM1O00151 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDLIM1O00151 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDLIM1O00151 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDLIM1O00151 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PDLIM1O00151 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDLIM1O00151 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PDLIM1O00151 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PDLIM1O00151 MIR346-201ENST00000362234 95 ntBASIC14.53□□□□□ -0.08
PDLIM1O00151 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
PDLIM1O00151 AL627223.1-201ENST00000416693 442 ntBASIC14.53□□□□□ -0.08
PDLIM1O00151 AL592309.1-201ENST00000443127 649 ntBASIC14.53□□□□□ -0.08
PDLIM1O00151 AC092183.1-201ENST00000469884 875 ntBASIC14.53□□□□□ -0.08
PDLIM1O00151 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.53□□□□□ -0.08
PDLIM1O00151 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PDLIM1O00151 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.53□□□□□ -0.08
PDLIM1O00151 AL138918.1-201ENST00000568306 659 ntBASIC14.53□□□□□ -0.08
PDLIM1O00151 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDLIM1O00151 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.53□□□□□ -0.08
PDLIM1O00151 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDLIM1O00151 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.53□□□□□ -0.08
PDLIM1O00151 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDLIM1O00151 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
PDLIM1O00151 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PDLIM1O00151 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
PDLIM1O00151 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDLIM1O00151 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDLIM1O00151 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
PDLIM1O00151 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDLIM1O00151 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDLIM1O00151 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
PDLIM1O00151 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC14.53□□□□□ -0.08
PDLIM1O00151 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC14.53□□□□□ -0.08
PDLIM1O00151 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDLIM1O00151 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC14.53□□□□□ -0.08
PDLIM1O00151 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
PDLIM1O00151 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
PDLIM1O00151 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.52□□□□□ -0.08
PDLIM1O00151 AL136982.4-201ENST00000437689 1740 ntBASIC14.52□□□□□ -0.08
PDLIM1O00151 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.52□□□□□ -0.08
PDLIM1O00151 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
PDLIM1O00151 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PDLIM1O00151 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.52□□□□□ -0.08
PDLIM1O00151 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.52□□□□□ -0.08
PDLIM1O00151 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.52□□□□□ -0.08
PDLIM1O00151 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
PDLIM1O00151 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PDLIM1O00151 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
PDLIM1O00151 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.52□□□□□ -0.08
PDLIM1O00151 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
PDLIM1O00151 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC14.52□□□□□ -0.08
PDLIM1O00151 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms