Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC188H7C350 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC188H7C350 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC188H7C350 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC15.78■□□□□ 0.12
CCDC188H7C350 AL157414.3-201ENST00000624276 1954 ntBASIC15.78■□□□□ 0.12
CCDC188H7C350 AC016397.2-201ENST00000624848 1985 ntBASIC15.78■□□□□ 0.12
CCDC188H7C350 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC188H7C350 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC188H7C350 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC188H7C350 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC188H7C350 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC188H7C350 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC188H7C350 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CCDC188H7C350 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CCDC188H7C350 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC188H7C350 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC188H7C350 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC188H7C350 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC188H7C350 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC188H7C350 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC188H7C350 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC188H7C350 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CCDC188H7C350 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC188H7C350 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CCDC188H7C350 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC188H7C350 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
CCDC188H7C350 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.78■□□□□ 0.12
CCDC188H7C350 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC188H7C350 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC188H7C350 CEND1P1-201ENST00000451006 455 ntBASIC15.78■□□□□ 0.12
CCDC188H7C350 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.78■□□□□ 0.12
CCDC188H7C350 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC188H7C350 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.78■□□□□ 0.12
CCDC188H7C350 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.78■□□□□ 0.12
CCDC188H7C350 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.78■□□□□ 0.12
CCDC188H7C350 MIR4453-201ENST00000584019 89 ntBASIC15.78■□□□□ 0.12
CCDC188H7C350 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC188H7C350 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC188H7C350 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.78■□□□□ 0.12
CCDC188H7C350 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC188H7C350 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC188H7C350 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC188H7C350 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC188H7C350 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC188H7C350 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC188H7C350 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC188H7C350 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC188H7C350 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC188H7C350 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC188H7C350 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC188H7C350 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC188H7C350 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC188H7C350 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC188H7C350 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC188H7C350 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC188H7C350 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.77■□□□□ 0.12
CCDC188H7C350 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC188H7C350 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC188H7C350 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC188H7C350 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC15.77■□□□□ 0.12
CCDC188H7C350 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC188H7C350 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
CCDC188H7C350 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
CCDC188H7C350 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC188H7C350 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC188H7C350 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.77■□□□□ 0.12
CCDC188H7C350 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC188H7C350 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15.77■□□□□ 0.12
CCDC188H7C350 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.77■□□□□ 0.12
CCDC188H7C350 AC004461.1-201ENST00000412461 403 ntBASIC15.77■□□□□ 0.12
CCDC188H7C350 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.77■□□□□ 0.12
CCDC188H7C350 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
CCDC188H7C350 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.77■□□□□ 0.12
CCDC188H7C350 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.77■□□□□ 0.12
CCDC188H7C350 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.77■□□□□ 0.12
CCDC188H7C350 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC188H7C350 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.77■□□□□ 0.12
CCDC188H7C350 MIR6080-201ENST00000617359 66 ntBASIC15.77■□□□□ 0.12
CCDC188H7C350 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC188H7C350 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC188H7C350 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC188H7C350 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC188H7C350 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.77■□□□□ 0.11
CCDC188H7C350 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.77■□□□□ 0.11
CCDC188H7C350 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC15.77■□□□□ 0.11
CCDC188H7C350 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC188H7C350 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC188H7C350 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC188H7C350 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC188H7C350 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
CCDC188H7C350 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
CCDC188H7C350 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC188H7C350 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC15.76■□□□□ 0.11
CCDC188H7C350 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC188H7C350 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.76■□□□□ 0.11
CCDC188H7C350 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC188H7C350 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC188H7C350 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC188H7C350 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC188H7C350 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms