Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 AL671277.1-201ENST00000429656 993 ntBASIC13.07□□□□□ -0.32
MEIS3P1A6NDR6 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC13.07□□□□□ -0.32
MEIS3P1A6NDR6 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC13.07□□□□□ -0.32
MEIS3P1A6NDR6 AC079776.4-201ENST00000511039 504 ntBASIC13.07□□□□□ -0.32
MEIS3P1A6NDR6 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC13.07□□□□□ -0.32
MEIS3P1A6NDR6 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC13.07□□□□□ -0.32
MEIS3P1A6NDR6 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
MEIS3P1A6NDR6 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
MEIS3P1A6NDR6 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
MEIS3P1A6NDR6 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
MEIS3P1A6NDR6 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC13.07□□□□□ -0.32
MEIS3P1A6NDR6 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
MEIS3P1A6NDR6 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.07□□□□□ -0.32
MEIS3P1A6NDR6 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.07□□□□□ -0.32
MEIS3P1A6NDR6 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
MEIS3P1A6NDR6 AKAP8P1-201ENST00000434743 1349 ntBASIC13.07□□□□□ -0.32
MEIS3P1A6NDR6 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
MEIS3P1A6NDR6 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
MEIS3P1A6NDR6 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.07□□□□□ -0.32
MEIS3P1A6NDR6 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
MEIS3P1A6NDR6 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
MEIS3P1A6NDR6 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
MEIS3P1A6NDR6 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
MEIS3P1A6NDR6 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
MEIS3P1A6NDR6 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
MEIS3P1A6NDR6 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
MEIS3P1A6NDR6 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
MEIS3P1A6NDR6 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
MEIS3P1A6NDR6 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
MEIS3P1A6NDR6 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
MEIS3P1A6NDR6 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
MEIS3P1A6NDR6 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
MEIS3P1A6NDR6 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.06□□□□□ -0.32
MEIS3P1A6NDR6 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
MEIS3P1A6NDR6 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
MEIS3P1A6NDR6 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
MEIS3P1A6NDR6 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
MEIS3P1A6NDR6 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
MEIS3P1A6NDR6 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
MEIS3P1A6NDR6 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC13.06□□□□□ -0.32
MEIS3P1A6NDR6 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
MEIS3P1A6NDR6 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
MEIS3P1A6NDR6 AL355306.1-201ENST00000415580 579 ntBASIC13.06□□□□□ -0.32
MEIS3P1A6NDR6 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
MEIS3P1A6NDR6 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC13.06□□□□□ -0.32
MEIS3P1A6NDR6 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC13.06□□□□□ -0.32
MEIS3P1A6NDR6 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC13.06□□□□□ -0.32
MEIS3P1A6NDR6 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
MEIS3P1A6NDR6 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
MEIS3P1A6NDR6 AP000842.3-202ENST00000569238 1080 ntBASIC13.06□□□□□ -0.32
MEIS3P1A6NDR6 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.06□□□□□ -0.32
MEIS3P1A6NDR6 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
MEIS3P1A6NDR6 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
MEIS3P1A6NDR6 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
MEIS3P1A6NDR6 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
MEIS3P1A6NDR6 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
MEIS3P1A6NDR6 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.06□□□□□ -0.32
MEIS3P1A6NDR6 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
MEIS3P1A6NDR6 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
MEIS3P1A6NDR6 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
MEIS3P1A6NDR6 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
MEIS3P1A6NDR6 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
MEIS3P1A6NDR6 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
MEIS3P1A6NDR6 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
MEIS3P1A6NDR6 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
MEIS3P1A6NDR6 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
MEIS3P1A6NDR6 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
MEIS3P1A6NDR6 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
MEIS3P1A6NDR6 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
MEIS3P1A6NDR6 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
MEIS3P1A6NDR6 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
MEIS3P1A6NDR6 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
MEIS3P1A6NDR6 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
MEIS3P1A6NDR6 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
MEIS3P1A6NDR6 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
MEIS3P1A6NDR6 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
MEIS3P1A6NDR6 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
MEIS3P1A6NDR6 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
MEIS3P1A6NDR6 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
MEIS3P1A6NDR6 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
MEIS3P1A6NDR6 AC104109.2-201ENST00000602919 1418 ntBASIC13.05□□□□□ -0.32
MEIS3P1A6NDR6 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.05□□□□□ -0.32
MEIS3P1A6NDR6 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.05□□□□□ -0.32
MEIS3P1A6NDR6 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
MEIS3P1A6NDR6 AL359881.3-201ENST00000602640 1721 ntBASIC13.05□□□□□ -0.32
MEIS3P1A6NDR6 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.05□□□□□ -0.32
MEIS3P1A6NDR6 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
MEIS3P1A6NDR6 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.05□□□□□ -0.32
MEIS3P1A6NDR6 AC012508.2-201ENST00000567613 1472 ntBASIC13.05□□□□□ -0.32
MEIS3P1A6NDR6 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
MEIS3P1A6NDR6 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
MEIS3P1A6NDR6 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
MEIS3P1A6NDR6 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
MEIS3P1A6NDR6 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
MEIS3P1A6NDR6 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
MEIS3P1A6NDR6 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
MEIS3P1A6NDR6 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
MEIS3P1A6NDR6 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
MEIS3P1A6NDR6 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.05□□□□□ -0.32
MEIS3P1A6NDR6 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms