Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 AC007686.3-201ENST00000619017 3487 ntBASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 PGF-202ENST00000405431 666 ntTSL 5 BASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 AC074338.1-201ENST00000416825 156 ntBASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 AC112492.5-201ENST00000421897 457 ntBASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 AL442647.2-201ENST00000429864 857 ntBASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 ACA64.2-201ENST00000459014 129 ntBASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 PAM16-204ENST00000571941 674 ntTSL 3 BASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 AC015936.2-201ENST00000593177 259 ntBASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 MIR6805-201ENST00000615055 62 ntBASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 CU634019.7-201ENST00000624153 1185 ntBASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 FP236241.2-201ENST00000624906 1185 ntBASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TCRBV4S1A1TA0A5B7 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
TCRBV4S1A1TA0A5B7 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
TCRBV4S1A1TA0A5B7 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TCRBV4S1A1TA0A5B7 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
TCRBV4S1A1TA0A5B7 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TCRBV4S1A1TA0A5B7 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TCRBV4S1A1TA0A5B7 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TCRBV4S1A1TA0A5B7 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TCRBV4S1A1TA0A5B7 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
TCRBV4S1A1TA0A5B7 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
TCRBV4S1A1TA0A5B7 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TCRBV4S1A1TA0A5B7 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
TCRBV4S1A1TA0A5B7 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TCRBV4S1A1TA0A5B7 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
TCRBV4S1A1TA0A5B7 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
TCRBV4S1A1TA0A5B7 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
TCRBV4S1A1TA0A5B7 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TCRBV4S1A1TA0A5B7 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
TCRBV4S1A1TA0A5B7 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
TCRBV4S1A1TA0A5B7 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TCRBV4S1A1TA0A5B7 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
TCRBV4S1A1TA0A5B7 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC12.24□□□□□ -0.45
TCRBV4S1A1TA0A5B7 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TCRBV4S1A1TA0A5B7 TOMM22P5-201ENST00000416399 439 ntBASIC12.24□□□□□ -0.45
TCRBV4S1A1TA0A5B7 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC12.24□□□□□ -0.45
TCRBV4S1A1TA0A5B7 AC134915.1-201ENST00000426461 574 ntBASIC12.24□□□□□ -0.45
TCRBV4S1A1TA0A5B7 AMT-204ENST00000427987 1646 ntTSL 5 BASIC12.24□□□□□ -0.45
TCRBV4S1A1TA0A5B7 KRT43P-201ENST00000434019 910 ntBASIC12.24□□□□□ -0.45
TCRBV4S1A1TA0A5B7 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC12.24□□□□□ -0.45
TCRBV4S1A1TA0A5B7 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC12.24□□□□□ -0.45
TCRBV4S1A1TA0A5B7 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TCRBV4S1A1TA0A5B7 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms