Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.67■□□□□ 0.1
HCFC2Q9Y5Z7 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
HCFC2Q9Y5Z7 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HCFC2Q9Y5Z7 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HCFC2Q9Y5Z7 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
HCFC2Q9Y5Z7 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
HCFC2Q9Y5Z7 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HCFC2Q9Y5Z7 WAC-202ENST00000347934 2839 ntTSL 5 BASIC15.67■□□□□ 0.1
HCFC2Q9Y5Z7 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.67■□□□□ 0.1
HCFC2Q9Y5Z7 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HCFC2Q9Y5Z7 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
HCFC2Q9Y5Z7 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.66■□□□□ 0.1
HCFC2Q9Y5Z7 AC090616.6-203ENST00000579186 1945 ntBASIC15.66■□□□□ 0.1
HCFC2Q9Y5Z7 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
HCFC2Q9Y5Z7 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HCFC2Q9Y5Z7 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.66■□□□□ 0.1
HCFC2Q9Y5Z7 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
HCFC2Q9Y5Z7 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HCFC2Q9Y5Z7 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HCFC2Q9Y5Z7 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.66■□□□□ 0.1
HCFC2Q9Y5Z7 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HCFC2Q9Y5Z7 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
HCFC2Q9Y5Z7 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HCFC2Q9Y5Z7 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HCFC2Q9Y5Z7 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HCFC2Q9Y5Z7 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
HCFC2Q9Y5Z7 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC15.66■□□□□ 0.1
HCFC2Q9Y5Z7 AC114501.1-201ENST00000445949 172 ntBASIC15.66■□□□□ 0.1
HCFC2Q9Y5Z7 RN7SL67P-201ENST00000492147 296 ntBASIC15.66■□□□□ 0.1
HCFC2Q9Y5Z7 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC15.66■□□□□ 0.1
HCFC2Q9Y5Z7 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC15.66■□□□□ 0.1
HCFC2Q9Y5Z7 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC15.66■□□□□ 0.1
HCFC2Q9Y5Z7 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HCFC2Q9Y5Z7 AC026803.1-201ENST00000569130 274 ntBASIC15.66■□□□□ 0.1
HCFC2Q9Y5Z7 HLA-C-210ENST00000640219 976 ntBASIC15.66■□□□□ 0.1
HCFC2Q9Y5Z7 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.66■□□□□ 0.1
HCFC2Q9Y5Z7 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HCFC2Q9Y5Z7 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
HCFC2Q9Y5Z7 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
HCFC2Q9Y5Z7 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.66■□□□□ 0.1
HCFC2Q9Y5Z7 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HCFC2Q9Y5Z7 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
HCFC2Q9Y5Z7 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HCFC2Q9Y5Z7 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.66■□□□□ 0.1
HCFC2Q9Y5Z7 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
HCFC2Q9Y5Z7 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.66■□□□□ 0.1
HCFC2Q9Y5Z7 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HCFC2Q9Y5Z7 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
HCFC2Q9Y5Z7 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.65■□□□□ 0.1
HCFC2Q9Y5Z7 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HCFC2Q9Y5Z7 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
HCFC2Q9Y5Z7 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HCFC2Q9Y5Z7 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC15.65■□□□□ 0.1
HCFC2Q9Y5Z7 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
HCFC2Q9Y5Z7 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
HCFC2Q9Y5Z7 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.65■□□□□ 0.1
HCFC2Q9Y5Z7 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
HCFC2Q9Y5Z7 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.65■□□□□ 0.1
HCFC2Q9Y5Z7 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HCFC2Q9Y5Z7 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HCFC2Q9Y5Z7 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.65■□□□□ 0.1
HCFC2Q9Y5Z7 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HCFC2Q9Y5Z7 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HCFC2Q9Y5Z7 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HCFC2Q9Y5Z7 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HCFC2Q9Y5Z7 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC15.65■□□□□ 0.1
HCFC2Q9Y5Z7 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
HCFC2Q9Y5Z7 LBH-202ENST00000401506 485 ntTSL 3 BASIC15.65■□□□□ 0.1
HCFC2Q9Y5Z7 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC15.65■□□□□ 0.1
HCFC2Q9Y5Z7 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC15.65■□□□□ 0.1
HCFC2Q9Y5Z7 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC15.65■□□□□ 0.1
HCFC2Q9Y5Z7 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC15.65■□□□□ 0.1
HCFC2Q9Y5Z7 RN7SL818P-201ENST00000485099 259 ntBASIC15.65■□□□□ 0.1
HCFC2Q9Y5Z7 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HCFC2Q9Y5Z7 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
HCFC2Q9Y5Z7 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC15.65■□□□□ 0.1
HCFC2Q9Y5Z7 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC15.65■□□□□ 0.1
HCFC2Q9Y5Z7 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HCFC2Q9Y5Z7 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC15.65■□□□□ 0.1
HCFC2Q9Y5Z7 AL109837.1-201ENST00000603272 613 ntBASIC15.65■□□□□ 0.1
HCFC2Q9Y5Z7 RN7SL725P-201ENST00000606439 259 ntBASIC15.65■□□□□ 0.1
HCFC2Q9Y5Z7 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
HCFC2Q9Y5Z7 AL157813.1-201ENST00000612996 587 ntBASIC15.65■□□□□ 0.1
HCFC2Q9Y5Z7 YRDCP1-201ENST00000621419 643 ntBASIC15.65■□□□□ 0.1
HCFC2Q9Y5Z7 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
HCFC2Q9Y5Z7 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HCFC2Q9Y5Z7 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.65■□□□□ 0.1
HCFC2Q9Y5Z7 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.65■□□□□ 0.1
HCFC2Q9Y5Z7 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.65■□□□□ 0.1
HCFC2Q9Y5Z7 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HCFC2Q9Y5Z7 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.65■□□□□ 0.1
HCFC2Q9Y5Z7 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
HCFC2Q9Y5Z7 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HCFC2Q9Y5Z7 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC15.65■□□□□ 0.1
HCFC2Q9Y5Z7 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.65■□□□□ 0.1
HCFC2Q9Y5Z7 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.65■□□□□ 0.1
HCFC2Q9Y5Z7 AC074138.1-201ENST00000611182 1303 ntBASIC15.65■□□□□ 0.1
HCFC2Q9Y5Z7 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HCFC2Q9Y5Z7 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HCFC2Q9Y5Z7 AC020916.1-201ENST00000587762 1774 ntBASIC15.64■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms