Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDHB7Q9Y5E2 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB7Q9Y5E2 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB7Q9Y5E2 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB7Q9Y5E2 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB7Q9Y5E2 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
PCDHB7Q9Y5E2 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB7Q9Y5E2 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB7Q9Y5E2 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB7Q9Y5E2 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB7Q9Y5E2 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
PCDHB7Q9Y5E2 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
PCDHB7Q9Y5E2 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB7Q9Y5E2 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.19■□□□□ 0.18
PCDHB7Q9Y5E2 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB7Q9Y5E2 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB7Q9Y5E2 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB7Q9Y5E2 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB7Q9Y5E2 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC16.19■□□□□ 0.18
PCDHB7Q9Y5E2 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB7Q9Y5E2 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC16.19■□□□□ 0.18
PCDHB7Q9Y5E2 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC16.19■□□□□ 0.18
PCDHB7Q9Y5E2 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB7Q9Y5E2 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB7Q9Y5E2 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB7Q9Y5E2 AL391005.1-201ENST00000623953 2435 ntBASIC16.19■□□□□ 0.18
PCDHB7Q9Y5E2 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB7Q9Y5E2 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB7Q9Y5E2 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.19■□□□□ 0.18
PCDHB7Q9Y5E2 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB7Q9Y5E2 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB7Q9Y5E2 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB7Q9Y5E2 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB7Q9Y5E2 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDHB7Q9Y5E2 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB7Q9Y5E2 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHB7Q9Y5E2 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHB7Q9Y5E2 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHB7Q9Y5E2 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHB7Q9Y5E2 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
PCDHB7Q9Y5E2 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDHB7Q9Y5E2 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHB7Q9Y5E2 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHB7Q9Y5E2 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHB7Q9Y5E2 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
PCDHB7Q9Y5E2 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.18■□□□□ 0.18
PCDHB7Q9Y5E2 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHB7Q9Y5E2 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDHB7Q9Y5E2 RN7SKP230-201ENST00000365642 335 ntBASIC16.18■□□□□ 0.18
PCDHB7Q9Y5E2 RBM38-204ENST00000371219 760 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDHB7Q9Y5E2 SERF2-209ENST00000409646 559 ntTSL 4 BASIC16.18■□□□□ 0.18
PCDHB7Q9Y5E2 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHB7Q9Y5E2 CMC1-204ENST00000423894 549 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDHB7Q9Y5E2 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDHB7Q9Y5E2 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.18■□□□□ 0.18
PCDHB7Q9Y5E2 AC006335.1-201ENST00000445200 547 ntBASIC16.18■□□□□ 0.18
PCDHB7Q9Y5E2 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDHB7Q9Y5E2 TMEM198B-204ENST00000484016 896 ntBASIC16.18■□□□□ 0.18
PCDHB7Q9Y5E2 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC16.18■□□□□ 0.18
PCDHB7Q9Y5E2 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC16.18■□□□□ 0.18
PCDHB7Q9Y5E2 SNORD3B-2-202ENST00000571722 791 ntBASIC16.18■□□□□ 0.18
PCDHB7Q9Y5E2 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC16.18■□□□□ 0.18
PCDHB7Q9Y5E2 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC16.18■□□□□ 0.18
PCDHB7Q9Y5E2 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC16.18■□□□□ 0.18
PCDHB7Q9Y5E2 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
PCDHB7Q9Y5E2 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHB7Q9Y5E2 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHB7Q9Y5E2 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHB7Q9Y5E2 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHB7Q9Y5E2 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHB7Q9Y5E2 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.18■□□□□ 0.18
PCDHB7Q9Y5E2 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHB7Q9Y5E2 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHB7Q9Y5E2 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHB7Q9Y5E2 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHB7Q9Y5E2 AL138725.1-201ENST00000407347 1314 ntBASIC16.18■□□□□ 0.18
PCDHB7Q9Y5E2 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC16.18■□□□□ 0.18
PCDHB7Q9Y5E2 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
PCDHB7Q9Y5E2 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHB7Q9Y5E2 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB7Q9Y5E2 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB7Q9Y5E2 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB7Q9Y5E2 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
PCDHB7Q9Y5E2 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB7Q9Y5E2 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB7Q9Y5E2 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB7Q9Y5E2 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB7Q9Y5E2 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB7Q9Y5E2 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHB7Q9Y5E2 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB7Q9Y5E2 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB7Q9Y5E2 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB7Q9Y5E2 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB7Q9Y5E2 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PCDHB7Q9Y5E2 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB7Q9Y5E2 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB7Q9Y5E2 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB7Q9Y5E2 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB7Q9Y5E2 AC091046.1-201ENST00000331871 207 ntBASIC16.17■□□□□ 0.18
PCDHB7Q9Y5E2 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms