Protein–RNA interactions for Protein: Q9UKZ1

CNOT11, CCR4-NOT transcription complex subunit 11, humanhuman

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11Q9UKZ1 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
CNOT11Q9UKZ1 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CNOT11Q9UKZ1 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CNOT11Q9UKZ1 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CNOT11Q9UKZ1 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CNOT11Q9UKZ1 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CNOT11Q9UKZ1 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CNOT11Q9UKZ1 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.63□□□□□ -0.07
CNOT11Q9UKZ1 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CNOT11Q9UKZ1 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CNOT11Q9UKZ1 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.63□□□□□ -0.07
CNOT11Q9UKZ1 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
CNOT11Q9UKZ1 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.63□□□□□ -0.07
CNOT11Q9UKZ1 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
CNOT11Q9UKZ1 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CNOT11Q9UKZ1 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
CNOT11Q9UKZ1 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CNOT11Q9UKZ1 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.63□□□□□ -0.07
CNOT11Q9UKZ1 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CNOT11Q9UKZ1 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CNOT11Q9UKZ1 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.63□□□□□ -0.07
CNOT11Q9UKZ1 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CNOT11Q9UKZ1 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CNOT11Q9UKZ1 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CNOT11Q9UKZ1 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CNOT11Q9UKZ1 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CNOT11Q9UKZ1 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CNOT11Q9UKZ1 AC089987.1-201ENST00000551654 2209 ntBASIC14.62□□□□□ -0.07
CNOT11Q9UKZ1 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CNOT11Q9UKZ1 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CNOT11Q9UKZ1 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CNOT11Q9UKZ1 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CNOT11Q9UKZ1 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CNOT11Q9UKZ1 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CNOT11Q9UKZ1 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
CNOT11Q9UKZ1 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CNOT11Q9UKZ1 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CNOT11Q9UKZ1 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CNOT11Q9UKZ1 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CNOT11Q9UKZ1 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CNOT11Q9UKZ1 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.62□□□□□ -0.07
CNOT11Q9UKZ1 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CNOT11Q9UKZ1 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.62□□□□□ -0.07
CNOT11Q9UKZ1 AC114501.2-201ENST00000439631 535 ntBASIC14.62□□□□□ -0.07
CNOT11Q9UKZ1 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.62□□□□□ -0.07
CNOT11Q9UKZ1 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.62□□□□□ -0.07
CNOT11Q9UKZ1 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.62□□□□□ -0.07
CNOT11Q9UKZ1 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.62□□□□□ -0.07
CNOT11Q9UKZ1 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.62□□□□□ -0.07
CNOT11Q9UKZ1 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.62□□□□□ -0.07
CNOT11Q9UKZ1 AC135586.1-201ENST00000539323 574 ntBASIC14.62□□□□□ -0.07
CNOT11Q9UKZ1 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CNOT11Q9UKZ1 AC025048.3-201ENST00000590609 569 ntBASIC14.62□□□□□ -0.07
CNOT11Q9UKZ1 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CNOT11Q9UKZ1 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.62□□□□□ -0.07
CNOT11Q9UKZ1 LINC02084-201ENST00000606069 1096 ntBASIC14.62□□□□□ -0.07
CNOT11Q9UKZ1 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.62□□□□□ -0.07
CNOT11Q9UKZ1 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CNOT11Q9UKZ1 AC005702.4-201ENST00000618393 416 ntBASIC14.62□□□□□ -0.07
CNOT11Q9UKZ1 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.62□□□□□ -0.07
CNOT11Q9UKZ1 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CNOT11Q9UKZ1 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CNOT11Q9UKZ1 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.62□□□□□ -0.07
CNOT11Q9UKZ1 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CNOT11Q9UKZ1 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.62□□□□□ -0.07
CNOT11Q9UKZ1 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CNOT11Q9UKZ1 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CNOT11Q9UKZ1 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CNOT11Q9UKZ1 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.62□□□□□ -0.07
CNOT11Q9UKZ1 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CNOT11Q9UKZ1 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CNOT11Q9UKZ1 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CNOT11Q9UKZ1 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.62□□□□□ -0.07
CNOT11Q9UKZ1 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CNOT11Q9UKZ1 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CNOT11Q9UKZ1 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.62□□□□□ -0.07
CNOT11Q9UKZ1 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CNOT11Q9UKZ1 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CNOT11Q9UKZ1 AC107918.4-201ENST00000641966 3141 ntBASIC14.61□□□□□ -0.07
CNOT11Q9UKZ1 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CNOT11Q9UKZ1 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.61□□□□□ -0.07
CNOT11Q9UKZ1 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.61□□□□□ -0.07
CNOT11Q9UKZ1 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.61□□□□□ -0.07
CNOT11Q9UKZ1 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CNOT11Q9UKZ1 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CNOT11Q9UKZ1 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CNOT11Q9UKZ1 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.61□□□□□ -0.07
CNOT11Q9UKZ1 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.61□□□□□ -0.07
CNOT11Q9UKZ1 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CNOT11Q9UKZ1 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.61□□□□□ -0.07
CNOT11Q9UKZ1 AC138761.1-201ENST00000584393 385 ntBASIC14.61□□□□□ -0.07
CNOT11Q9UKZ1 AL109936.8-201ENST00000641772 604 ntBASIC14.61□□□□□ -0.07
CNOT11Q9UKZ1 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CNOT11Q9UKZ1 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.61□□□□□ -0.07
CNOT11Q9UKZ1 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CNOT11Q9UKZ1 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
CNOT11Q9UKZ1 AL161772.1-201ENST00000610494 4412 ntBASIC14.61□□□□□ -0.07
CNOT11Q9UKZ1 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.61□□□□□ -0.07
CNOT11Q9UKZ1 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.61□□□□□ -0.07
CNOT11Q9UKZ1 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms