Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.36□□□□□ -0.11
VAPAQ9P0L0 GAPDHP40-201ENST00000505218 1006 ntBASIC14.36□□□□□ -0.11
VAPAQ9P0L0 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.36□□□□□ -0.11
VAPAQ9P0L0 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.36□□□□□ -0.11
VAPAQ9P0L0 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
VAPAQ9P0L0 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VAPAQ9P0L0 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.36□□□□□ -0.11
VAPAQ9P0L0 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VAPAQ9P0L0 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.36□□□□□ -0.11
VAPAQ9P0L0 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
VAPAQ9P0L0 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
VAPAQ9P0L0 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.36□□□□□ -0.11
VAPAQ9P0L0 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
VAPAQ9P0L0 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
VAPAQ9P0L0 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VAPAQ9P0L0 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.36□□□□□ -0.11
VAPAQ9P0L0 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VAPAQ9P0L0 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VAPAQ9P0L0 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VAPAQ9P0L0 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
VAPAQ9P0L0 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.36□□□□□ -0.11
VAPAQ9P0L0 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VAPAQ9P0L0 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VAPAQ9P0L0 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VAPAQ9P0L0 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VAPAQ9P0L0 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VAPAQ9P0L0 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
VAPAQ9P0L0 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
VAPAQ9P0L0 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.36□□□□□ -0.11
VAPAQ9P0L0 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VAPAQ9P0L0 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VAPAQ9P0L0 AL137783.1-201ENST00000623494 1896 ntBASIC14.35□□□□□ -0.11
VAPAQ9P0L0 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
VAPAQ9P0L0 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VAPAQ9P0L0 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.35□□□□□ -0.11
VAPAQ9P0L0 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
VAPAQ9P0L0 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.35□□□□□ -0.11
VAPAQ9P0L0 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VAPAQ9P0L0 CNN2P11-201ENST00000429351 262 ntBASIC14.35□□□□□ -0.11
VAPAQ9P0L0 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.35□□□□□ -0.11
VAPAQ9P0L0 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.35□□□□□ -0.11
VAPAQ9P0L0 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.35□□□□□ -0.11
VAPAQ9P0L0 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.35□□□□□ -0.11
VAPAQ9P0L0 AC109322.1-201ENST00000524499 1264 ntBASIC14.35□□□□□ -0.11
VAPAQ9P0L0 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.35□□□□□ -0.11
VAPAQ9P0L0 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.35□□□□□ -0.11
VAPAQ9P0L0 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.35□□□□□ -0.11
VAPAQ9P0L0 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.35□□□□□ -0.11
VAPAQ9P0L0 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VAPAQ9P0L0 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.35□□□□□ -0.11
VAPAQ9P0L0 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VAPAQ9P0L0 AC073592.8-201ENST00000624126 511 ntBASIC14.35□□□□□ -0.11
VAPAQ9P0L0 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.35□□□□□ -0.11
VAPAQ9P0L0 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.35□□□□□ -0.11
VAPAQ9P0L0 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VAPAQ9P0L0 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VAPAQ9P0L0 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VAPAQ9P0L0 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.35□□□□□ -0.11
VAPAQ9P0L0 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VAPAQ9P0L0 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VAPAQ9P0L0 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
VAPAQ9P0L0 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
VAPAQ9P0L0 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.35□□□□□ -0.11
VAPAQ9P0L0 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.35□□□□□ -0.11
VAPAQ9P0L0 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VAPAQ9P0L0 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.35□□□□□ -0.11
VAPAQ9P0L0 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
VAPAQ9P0L0 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
VAPAQ9P0L0 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.35□□□□□ -0.11
VAPAQ9P0L0 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
VAPAQ9P0L0 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.35□□□□□ -0.11
VAPAQ9P0L0 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
VAPAQ9P0L0 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VAPAQ9P0L0 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
VAPAQ9P0L0 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VAPAQ9P0L0 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.35□□□□□ -0.11
VAPAQ9P0L0 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
VAPAQ9P0L0 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
VAPAQ9P0L0 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VAPAQ9P0L0 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
VAPAQ9P0L0 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
VAPAQ9P0L0 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
VAPAQ9P0L0 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.34□□□□□ -0.11
VAPAQ9P0L0 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
VAPAQ9P0L0 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
VAPAQ9P0L0 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.34□□□□□ -0.11
VAPAQ9P0L0 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.34□□□□□ -0.11
VAPAQ9P0L0 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VAPAQ9P0L0 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.34□□□□□ -0.11
VAPAQ9P0L0 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
VAPAQ9P0L0 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VAPAQ9P0L0 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
VAPAQ9P0L0 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.34□□□□□ -0.11
VAPAQ9P0L0 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
VAPAQ9P0L0 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
VAPAQ9P0L0 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
VAPAQ9P0L0 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.34□□□□□ -0.11
VAPAQ9P0L0 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.34□□□□□ -0.11
VAPAQ9P0L0 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VAPAQ9P0L0 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms