Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
THUMPD1Q9NXG2 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
THUMPD1Q9NXG2 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
THUMPD1Q9NXG2 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
THUMPD1Q9NXG2 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
THUMPD1Q9NXG2 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
THUMPD1Q9NXG2 KRT18P13-201ENST00000400056 1290 ntBASIC14.33□□□□□ -0.12
THUMPD1Q9NXG2 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.33□□□□□ -0.12
THUMPD1Q9NXG2 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.33□□□□□ -0.12
THUMPD1Q9NXG2 DNAJB3-202ENST00000449667 1266 ntBASIC14.33□□□□□ -0.12
THUMPD1Q9NXG2 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.33□□□□□ -0.12
THUMPD1Q9NXG2 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.33□□□□□ -0.12
THUMPD1Q9NXG2 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
THUMPD1Q9NXG2 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.33□□□□□ -0.12
THUMPD1Q9NXG2 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.33□□□□□ -0.12
THUMPD1Q9NXG2 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
THUMPD1Q9NXG2 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
THUMPD1Q9NXG2 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.33□□□□□ -0.12
THUMPD1Q9NXG2 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
THUMPD1Q9NXG2 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
THUMPD1Q9NXG2 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
THUMPD1Q9NXG2 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
THUMPD1Q9NXG2 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
THUMPD1Q9NXG2 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
THUMPD1Q9NXG2 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.33□□□□□ -0.12
THUMPD1Q9NXG2 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
THUMPD1Q9NXG2 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
THUMPD1Q9NXG2 HSPA7-201ENST00000445535 1927 ntBASIC14.33□□□□□ -0.12
THUMPD1Q9NXG2 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
THUMPD1Q9NXG2 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.33□□□□□ -0.12
THUMPD1Q9NXG2 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
THUMPD1Q9NXG2 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
THUMPD1Q9NXG2 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.33□□□□□ -0.12
THUMPD1Q9NXG2 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
THUMPD1Q9NXG2 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
THUMPD1Q9NXG2 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
THUMPD1Q9NXG2 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.32□□□□□ -0.12
THUMPD1Q9NXG2 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
THUMPD1Q9NXG2 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
THUMPD1Q9NXG2 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
THUMPD1Q9NXG2 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
THUMPD1Q9NXG2 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.32□□□□□ -0.12
THUMPD1Q9NXG2 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
THUMPD1Q9NXG2 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
THUMPD1Q9NXG2 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
THUMPD1Q9NXG2 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.32□□□□□ -0.12
THUMPD1Q9NXG2 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.32□□□□□ -0.12
THUMPD1Q9NXG2 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.32□□□□□ -0.12
THUMPD1Q9NXG2 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
THUMPD1Q9NXG2 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
THUMPD1Q9NXG2 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
THUMPD1Q9NXG2 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.32□□□□□ -0.12
THUMPD1Q9NXG2 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
THUMPD1Q9NXG2 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
THUMPD1Q9NXG2 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.32□□□□□ -0.12
THUMPD1Q9NXG2 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.32□□□□□ -0.12
THUMPD1Q9NXG2 AC114501.2-201ENST00000439631 535 ntBASIC14.32□□□□□ -0.12
THUMPD1Q9NXG2 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.32□□□□□ -0.12
THUMPD1Q9NXG2 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
THUMPD1Q9NXG2 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.32□□□□□ -0.12
THUMPD1Q9NXG2 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.32□□□□□ -0.12
THUMPD1Q9NXG2 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.32□□□□□ -0.12
THUMPD1Q9NXG2 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.32□□□□□ -0.12
THUMPD1Q9NXG2 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
THUMPD1Q9NXG2 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.32□□□□□ -0.12
THUMPD1Q9NXG2 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.32□□□□□ -0.12
THUMPD1Q9NXG2 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
THUMPD1Q9NXG2 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
THUMPD1Q9NXG2 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
THUMPD1Q9NXG2 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
THUMPD1Q9NXG2 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
THUMPD1Q9NXG2 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
THUMPD1Q9NXG2 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.32□□□□□ -0.12
THUMPD1Q9NXG2 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
THUMPD1Q9NXG2 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
THUMPD1Q9NXG2 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
THUMPD1Q9NXG2 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.32□□□□□ -0.12
THUMPD1Q9NXG2 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
THUMPD1Q9NXG2 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
THUMPD1Q9NXG2 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
THUMPD1Q9NXG2 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
THUMPD1Q9NXG2 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
THUMPD1Q9NXG2 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
THUMPD1Q9NXG2 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
THUMPD1Q9NXG2 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
THUMPD1Q9NXG2 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.31□□□□□ -0.12
THUMPD1Q9NXG2 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
THUMPD1Q9NXG2 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
THUMPD1Q9NXG2 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
THUMPD1Q9NXG2 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
THUMPD1Q9NXG2 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
THUMPD1Q9NXG2 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
THUMPD1Q9NXG2 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
THUMPD1Q9NXG2 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
THUMPD1Q9NXG2 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
THUMPD1Q9NXG2 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
THUMPD1Q9NXG2 AL139400.1-201ENST00000366220 510 ntBASIC14.31□□□□□ -0.12
THUMPD1Q9NXG2 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.31□□□□□ -0.12
THUMPD1Q9NXG2 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.31□□□□□ -0.12
THUMPD1Q9NXG2 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 619.6 ms