Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC52A1Q9NWF4 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC52A1Q9NWF4 F10-203ENST00000409306 1450 ntTSL 3 BASIC21.26■□□□□ 0.99
SLC52A1Q9NWF4 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC52A1Q9NWF4 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC52A1Q9NWF4 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SLC52A1Q9NWF4 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC52A1Q9NWF4 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC52A1Q9NWF4 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC21.25■□□□□ 0.99
SLC52A1Q9NWF4 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SLC52A1Q9NWF4 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SLC52A1Q9NWF4 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC21.25■□□□□ 0.99
SLC52A1Q9NWF4 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC21.25■□□□□ 0.99
SLC52A1Q9NWF4 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC52A1Q9NWF4 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC52A1Q9NWF4 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC52A1Q9NWF4 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC21.25■□□□□ 0.99
SLC52A1Q9NWF4 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC21.25■□□□□ 0.99
SLC52A1Q9NWF4 MRPL22P1-201ENST00000505398 616 ntBASIC21.25■□□□□ 0.99
SLC52A1Q9NWF4 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
SLC52A1Q9NWF4 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC21.25■□□□□ 0.99
SLC52A1Q9NWF4 AC105137.3-201ENST00000617588 984 ntBASIC21.25■□□□□ 0.99
SLC52A1Q9NWF4 AL132780.4-201ENST00000624870 1135 ntBASIC21.25■□□□□ 0.99
SLC52A1Q9NWF4 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
SLC52A1Q9NWF4 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC52A1Q9NWF4 REXO1L2P-201ENST00000425429 2069 ntBASIC21.25■□□□□ 0.99
SLC52A1Q9NWF4 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC52A1Q9NWF4 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC52A1Q9NWF4 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC21.25■□□□□ 0.99
SLC52A1Q9NWF4 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC21.24■□□□□ 0.99
SLC52A1Q9NWF4 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
SLC52A1Q9NWF4 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
SLC52A1Q9NWF4 PRAL-201ENST00000624952 3286 ntBASIC21.24■□□□□ 0.99
SLC52A1Q9NWF4 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC52A1Q9NWF4 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC21.24■□□□□ 0.99
SLC52A1Q9NWF4 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC52A1Q9NWF4 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC52A1Q9NWF4 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC21.24■□□□□ 0.99
SLC52A1Q9NWF4 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SLC52A1Q9NWF4 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC21.24■□□□□ 0.99
SLC52A1Q9NWF4 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC21.24■□□□□ 0.99
SLC52A1Q9NWF4 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC21.24■□□□□ 0.99
SLC52A1Q9NWF4 AC027237.1-201ENST00000560942 655 ntBASIC21.24■□□□□ 0.99
SLC52A1Q9NWF4 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
SLC52A1Q9NWF4 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC21.24■□□□□ 0.99
SLC52A1Q9NWF4 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC21.24■□□□□ 0.99
SLC52A1Q9NWF4 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC21.24■□□□□ 0.99
SLC52A1Q9NWF4 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC21.24■□□□□ 0.99
SLC52A1Q9NWF4 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SLC52A1Q9NWF4 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SLC52A1Q9NWF4 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SLC52A1Q9NWF4 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC21.24■□□□□ 0.99
SLC52A1Q9NWF4 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC52A1Q9NWF4 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC52A1Q9NWF4 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
SLC52A1Q9NWF4 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC52A1Q9NWF4 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC21.24■□□□□ 0.99
SLC52A1Q9NWF4 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
SLC52A1Q9NWF4 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SLC52A1Q9NWF4 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC21.23■□□□□ 0.99
SLC52A1Q9NWF4 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC21.23■□□□□ 0.99
SLC52A1Q9NWF4 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC52A1Q9NWF4 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC52A1Q9NWF4 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC52A1Q9NWF4 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC52A1Q9NWF4 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
SLC52A1Q9NWF4 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC52A1Q9NWF4 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC21.23■□□□□ 0.99
SLC52A1Q9NWF4 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC21.23■□□□□ 0.99
SLC52A1Q9NWF4 PTK2-225ENST00000520892 571 ntTSL 4 BASIC21.23■□□□□ 0.99
SLC52A1Q9NWF4 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC21.23■□□□□ 0.99
SLC52A1Q9NWF4 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SLC52A1Q9NWF4 POLD4-208ENST00000532830 904 ntTSL 3 BASIC21.23■□□□□ 0.99
SLC52A1Q9NWF4 AC005618.3-201ENST00000624928 458 ntBASIC21.23■□□□□ 0.99
SLC52A1Q9NWF4 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC52A1Q9NWF4 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC52A1Q9NWF4 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC52A1Q9NWF4 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
SLC52A1Q9NWF4 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC52A1Q9NWF4 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC21.23■□□□□ 0.99
SLC52A1Q9NWF4 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SLC52A1Q9NWF4 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC52A1Q9NWF4 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SLC52A1Q9NWF4 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
SLC52A1Q9NWF4 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC52A1Q9NWF4 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC52A1Q9NWF4 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC21.23■□□□□ 0.99
SLC52A1Q9NWF4 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC21.23■□□□□ 0.99
SLC52A1Q9NWF4 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC52A1Q9NWF4 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC21.22■□□□□ 0.99
SLC52A1Q9NWF4 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
SLC52A1Q9NWF4 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC21.22■□□□□ 0.99
SLC52A1Q9NWF4 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SLC52A1Q9NWF4 AC009093.10-201ENST00000641956 1442 ntBASIC21.22■□□□□ 0.99
SLC52A1Q9NWF4 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC52A1Q9NWF4 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC21.22■□□□□ 0.99
SLC52A1Q9NWF4 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC21.22■□□□□ 0.99
SLC52A1Q9NWF4 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC52A1Q9NWF4 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SLC52A1Q9NWF4 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms