Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC12.68□□□□□ -0.38
LIN7CQ9NUP9 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC12.68□□□□□ -0.38
LIN7CQ9NUP9 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC12.68□□□□□ -0.38
LIN7CQ9NUP9 PTK7-212ENST00000476760 902 ntTSL 2 BASIC12.68□□□□□ -0.38
LIN7CQ9NUP9 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC12.68□□□□□ -0.38
LIN7CQ9NUP9 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC12.68□□□□□ -0.38
LIN7CQ9NUP9 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LIN7CQ9NUP9 AQP6-203ENST00000551733 849 ntTSL 3 BASIC12.68□□□□□ -0.38
LIN7CQ9NUP9 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC12.68□□□□□ -0.38
LIN7CQ9NUP9 AC005498.2-205ENST00000593218 784 ntBASIC12.68□□□□□ -0.38
LIN7CQ9NUP9 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC12.68□□□□□ -0.38
LIN7CQ9NUP9 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LIN7CQ9NUP9 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LIN7CQ9NUP9 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
LIN7CQ9NUP9 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC12.68□□□□□ -0.38
LIN7CQ9NUP9 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
LIN7CQ9NUP9 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LIN7CQ9NUP9 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LIN7CQ9NUP9 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LIN7CQ9NUP9 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
LIN7CQ9NUP9 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LIN7CQ9NUP9 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC12.68□□□□□ -0.38
LIN7CQ9NUP9 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LIN7CQ9NUP9 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LIN7CQ9NUP9 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
LIN7CQ9NUP9 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
LIN7CQ9NUP9 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
LIN7CQ9NUP9 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LIN7CQ9NUP9 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC12.67□□□□□ -0.38
LIN7CQ9NUP9 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LIN7CQ9NUP9 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
LIN7CQ9NUP9 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LIN7CQ9NUP9 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC12.67□□□□□ -0.38
LIN7CQ9NUP9 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
LIN7CQ9NUP9 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LIN7CQ9NUP9 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
LIN7CQ9NUP9 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC12.67□□□□□ -0.38
LIN7CQ9NUP9 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC12.67□□□□□ -0.38
LIN7CQ9NUP9 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LIN7CQ9NUP9 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LIN7CQ9NUP9 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC12.67□□□□□ -0.38
LIN7CQ9NUP9 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LIN7CQ9NUP9 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC12.67□□□□□ -0.38
LIN7CQ9NUP9 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
LIN7CQ9NUP9 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
LIN7CQ9NUP9 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC12.67□□□□□ -0.38
LIN7CQ9NUP9 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC12.67□□□□□ -0.38
LIN7CQ9NUP9 NIN-202ENST00000324330 4364 ntTSL 5 BASIC12.67□□□□□ -0.38
LIN7CQ9NUP9 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LIN7CQ9NUP9 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
LIN7CQ9NUP9 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LIN7CQ9NUP9 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC12.67□□□□□ -0.38
LIN7CQ9NUP9 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LIN7CQ9NUP9 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
LIN7CQ9NUP9 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC12.67□□□□□ -0.38
LIN7CQ9NUP9 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LIN7CQ9NUP9 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC12.67□□□□□ -0.38
LIN7CQ9NUP9 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LIN7CQ9NUP9 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
LIN7CQ9NUP9 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC12.67□□□□□ -0.38
LIN7CQ9NUP9 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LIN7CQ9NUP9 AL133267.1-201ENST00000398220 340 ntBASIC12.67□□□□□ -0.38
LIN7CQ9NUP9 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC12.67□□□□□ -0.38
LIN7CQ9NUP9 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC12.67□□□□□ -0.38
LIN7CQ9NUP9 ZNF890P-202ENST00000530367 1156 ntBASIC12.67□□□□□ -0.38
LIN7CQ9NUP9 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC12.67□□□□□ -0.38
LIN7CQ9NUP9 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC12.67□□□□□ -0.38
LIN7CQ9NUP9 AL390955.2-201ENST00000603032 514 ntBASIC12.67□□□□□ -0.38
LIN7CQ9NUP9 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LIN7CQ9NUP9 AL355385.1-201ENST00000606123 409 ntBASIC12.67□□□□□ -0.38
LIN7CQ9NUP9 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC12.67□□□□□ -0.38
LIN7CQ9NUP9 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
LIN7CQ9NUP9 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC12.67□□□□□ -0.38
LIN7CQ9NUP9 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LIN7CQ9NUP9 AL645728.2-202ENST00000641679 227 ntBASIC12.67□□□□□ -0.38
LIN7CQ9NUP9 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LIN7CQ9NUP9 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LIN7CQ9NUP9 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC12.67□□□□□ -0.38
LIN7CQ9NUP9 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
LIN7CQ9NUP9 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
LIN7CQ9NUP9 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC12.67□□□□□ -0.38
LIN7CQ9NUP9 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LIN7CQ9NUP9 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC12.67□□□□□ -0.38
LIN7CQ9NUP9 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
LIN7CQ9NUP9 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LIN7CQ9NUP9 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LIN7CQ9NUP9 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
LIN7CQ9NUP9 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LIN7CQ9NUP9 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC12.67□□□□□ -0.38
LIN7CQ9NUP9 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
LIN7CQ9NUP9 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LIN7CQ9NUP9 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LIN7CQ9NUP9 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LIN7CQ9NUP9 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LIN7CQ9NUP9 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LIN7CQ9NUP9 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LIN7CQ9NUP9 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LIN7CQ9NUP9 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
LIN7CQ9NUP9 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LIN7CQ9NUP9 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms