Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NKX6-2Q9C056 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC12.35□□□□□ -0.43
NKX6-2Q9C056 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
NKX6-2Q9C056 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
NKX6-2Q9C056 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC12.35□□□□□ -0.43
NKX6-2Q9C056 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
NKX6-2Q9C056 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
NKX6-2Q9C056 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
NKX6-2Q9C056 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC12.35□□□□□ -0.43
NKX6-2Q9C056 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
NKX6-2Q9C056 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC12.35□□□□□ -0.43
NKX6-2Q9C056 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NKX6-2Q9C056 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NKX6-2Q9C056 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC12.34□□□□□ -0.43
NKX6-2Q9C056 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC12.34□□□□□ -0.43
NKX6-2Q9C056 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NKX6-2Q9C056 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC12.34□□□□□ -0.43
NKX6-2Q9C056 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC12.34□□□□□ -0.43
NKX6-2Q9C056 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
NKX6-2Q9C056 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
NKX6-2Q9C056 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NKX6-2Q9C056 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
NKX6-2Q9C056 AC134407.2-201ENST00000625089 1978 ntBASIC12.34□□□□□ -0.43
NKX6-2Q9C056 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NKX6-2Q9C056 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
NKX6-2Q9C056 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC12.34□□□□□ -0.43
NKX6-2Q9C056 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NKX6-2Q9C056 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NKX6-2Q9C056 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
NKX6-2Q9C056 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
NKX6-2Q9C056 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NKX6-2Q9C056 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
NKX6-2Q9C056 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NKX6-2Q9C056 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC12.34□□□□□ -0.43
NKX6-2Q9C056 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
NKX6-2Q9C056 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NKX6-2Q9C056 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
NKX6-2Q9C056 AL645939.2-201ENST00000427340 991 ntBASIC12.34□□□□□ -0.43
NKX6-2Q9C056 AC104076.2-201ENST00000448912 469 ntBASIC12.34□□□□□ -0.43
NKX6-2Q9C056 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
NKX6-2Q9C056 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC12.34□□□□□ -0.43
NKX6-2Q9C056 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC12.34□□□□□ -0.43
NKX6-2Q9C056 AP002414.4-201ENST00000589764 1148 ntBASIC12.34□□□□□ -0.43
NKX6-2Q9C056 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC12.34□□□□□ -0.43
NKX6-2Q9C056 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC12.34□□□□□ -0.43
NKX6-2Q9C056 CICP1-201ENST00000416803 2410 ntBASIC12.34□□□□□ -0.43
NKX6-2Q9C056 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
NKX6-2Q9C056 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC12.34□□□□□ -0.43
NKX6-2Q9C056 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC12.34□□□□□ -0.43
NKX6-2Q9C056 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
NKX6-2Q9C056 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NKX6-2Q9C056 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NKX6-2Q9C056 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NKX6-2Q9C056 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NKX6-2Q9C056 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
NKX6-2Q9C056 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC12.34□□□□□ -0.43
NKX6-2Q9C056 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
NKX6-2Q9C056 GOLGA2P5-201ENST00000266746 2395 ntBASIC12.34□□□□□ -0.43
NKX6-2Q9C056 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NKX6-2Q9C056 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC12.34□□□□□ -0.43
NKX6-2Q9C056 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC12.34□□□□□ -0.43
NKX6-2Q9C056 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
NKX6-2Q9C056 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC12.34□□□□□ -0.43
NKX6-2Q9C056 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC12.34□□□□□ -0.43
NKX6-2Q9C056 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC12.34□□□□□ -0.43
NKX6-2Q9C056 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NKX6-2Q9C056 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
NKX6-2Q9C056 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
NKX6-2Q9C056 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NKX6-2Q9C056 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NKX6-2Q9C056 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NKX6-2Q9C056 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC12.33□□□□□ -0.44
NKX6-2Q9C056 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC12.33□□□□□ -0.44
NKX6-2Q9C056 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC12.33□□□□□ -0.44
NKX6-2Q9C056 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC12.33□□□□□ -0.44
NKX6-2Q9C056 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NKX6-2Q9C056 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NKX6-2Q9C056 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NKX6-2Q9C056 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
NKX6-2Q9C056 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC12.33□□□□□ -0.44
NKX6-2Q9C056 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NKX6-2Q9C056 RELA-227ENST00000615805 2236 ntTSL 5 BASIC12.33□□□□□ -0.44
NKX6-2Q9C056 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NKX6-2Q9C056 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC12.33□□□□□ -0.44
NKX6-2Q9C056 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC12.33□□□□□ -0.44
NKX6-2Q9C056 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
NKX6-2Q9C056 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NKX6-2Q9C056 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC12.33□□□□□ -0.44
NKX6-2Q9C056 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
NKX6-2Q9C056 AC093724.1-201ENST00000448659 1027 ntBASIC12.33□□□□□ -0.44
NKX6-2Q9C056 BET1L-206ENST00000486280 665 ntTSL 3 BASIC12.33□□□□□ -0.44
NKX6-2Q9C056 MMP17-203ENST00000535004 719 ntTSL 3 BASIC12.33□□□□□ -0.44
NKX6-2Q9C056 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
NKX6-2Q9C056 AP001269.4-201ENST00000609611 512 ntBASIC12.33□□□□□ -0.44
NKX6-2Q9C056 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NKX6-2Q9C056 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NKX6-2Q9C056 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
NKX6-2Q9C056 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC12.33□□□□□ -0.44
NKX6-2Q9C056 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
NKX6-2Q9C056 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms