Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
TRIM2Q9C040 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRIM2Q9C040 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRIM2Q9C040 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRIM2Q9C040 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRIM2Q9C040 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRIM2Q9C040 AC232323.1-201ENST00000540724 2099 ntBASIC14.02□□□□□ -0.17
TRIM2Q9C040 REXO1L5P-201ENST00000622260 2098 ntBASIC14.02□□□□□ -0.17
TRIM2Q9C040 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRIM2Q9C040 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.02□□□□□ -0.17
TRIM2Q9C040 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.02□□□□□ -0.17
TRIM2Q9C040 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRIM2Q9C040 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRIM2Q9C040 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.01□□□□□ -0.17
TRIM2Q9C040 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM2Q9C040 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM2Q9C040 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM2Q9C040 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
TRIM2Q9C040 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
TRIM2Q9C040 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM2Q9C040 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM2Q9C040 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM2Q9C040 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.01□□□□□ -0.17
TRIM2Q9C040 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM2Q9C040 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM2Q9C040 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM2Q9C040 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.01□□□□□ -0.17
TRIM2Q9C040 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM2Q9C040 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM2Q9C040 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TRIM2Q9C040 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM2Q9C040 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM2Q9C040 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM2Q9C040 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM2Q9C040 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TRIM2Q9C040 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM2Q9C040 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM2Q9C040 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM2Q9C040 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.01□□□□□ -0.17
TRIM2Q9C040 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM2Q9C040 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TRIM2Q9C040 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM2Q9C040 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM2Q9C040 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM2Q9C040 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM2Q9C040 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
TRIM2Q9C040 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
TRIM2Q9C040 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.01□□□□□ -0.17
TRIM2Q9C040 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.01□□□□□ -0.17
TRIM2Q9C040 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM2Q9C040 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.01□□□□□ -0.17
TRIM2Q9C040 CRB3P1-201ENST00000449338 276 ntBASIC14.01□□□□□ -0.17
TRIM2Q9C040 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM2Q9C040 GAPDHP40-201ENST00000505218 1006 ntBASIC14.01□□□□□ -0.17
TRIM2Q9C040 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM2Q9C040 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.01□□□□□ -0.17
TRIM2Q9C040 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TRIM2Q9C040 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.01□□□□□ -0.17
TRIM2Q9C040 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.01□□□□□ -0.17
TRIM2Q9C040 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.01□□□□□ -0.17
TRIM2Q9C040 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.01□□□□□ -0.17
TRIM2Q9C040 AC008738.7-201ENST00000609744 511 ntBASIC14.01□□□□□ -0.17
TRIM2Q9C040 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM2Q9C040 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.01□□□□□ -0.17
TRIM2Q9C040 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM2Q9C040 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TRIM2Q9C040 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM2Q9C040 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM2Q9C040 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.01□□□□□ -0.17
TRIM2Q9C040 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM2Q9C040 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM2Q9C040 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.01□□□□□ -0.17
TRIM2Q9C040 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM2Q9C040 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM2Q9C040 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM2Q9C040 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM2Q9C040 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
TRIM2Q9C040 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.01□□□□□ -0.17
TRIM2Q9C040 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM2Q9C040 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRIM2Q9C040 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14□□□□□ -0.17
TRIM2Q9C040 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TRIM2Q9C040 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
TRIM2Q9C040 CLK3P2-201ENST00000427566 1453 ntBASIC14□□□□□ -0.17
TRIM2Q9C040 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRIM2Q9C040 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TRIM2Q9C040 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TRIM2Q9C040 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
TRIM2Q9C040 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRIM2Q9C040 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRIM2Q9C040 LILRP1-201ENST00000444199 1370 ntBASIC14□□□□□ -0.17
TRIM2Q9C040 AL360270.3-201ENST00000609118 1348 ntBASIC14□□□□□ -0.17
TRIM2Q9C040 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC14□□□□□ -0.17
TRIM2Q9C040 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRIM2Q9C040 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TRIM2Q9C040 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRIM2Q9C040 PIN1P1-201ENST00000412108 996 ntBASIC14□□□□□ -0.17
TRIM2Q9C040 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14□□□□□ -0.17
TRIM2Q9C040 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14□□□□□ -0.17
TRIM2Q9C040 SPTLC1P1-201ENST00000447199 261 ntBASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms