Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.3■□□□□ 0.04
NDNQ99608 AC135586.1-201ENST00000539323 574 ntBASIC15.3■□□□□ 0.04
NDNQ99608 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NDNQ99608 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NDNQ99608 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NDNQ99608 AC092337.1-201ENST00000568699 1129 ntBASIC15.3■□□□□ 0.04
NDNQ99608 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.3■□□□□ 0.04
NDNQ99608 AC011467.4-201ENST00000594891 528 ntBASIC15.3■□□□□ 0.04
NDNQ99608 AL390955.2-201ENST00000603032 514 ntBASIC15.3■□□□□ 0.04
NDNQ99608 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.3■□□□□ 0.04
NDNQ99608 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
NDNQ99608 AC004840.1-201ENST00000636359 365 ntBASIC15.3■□□□□ 0.04
NDNQ99608 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDNQ99608 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDNQ99608 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDNQ99608 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDNQ99608 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDNQ99608 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
NDNQ99608 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
NDNQ99608 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDNQ99608 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC15.29■□□□□ 0.04
NDNQ99608 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.29■□□□□ 0.04
NDNQ99608 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDNQ99608 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDNQ99608 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NDNQ99608 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDNQ99608 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDNQ99608 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.29■□□□□ 0.04
NDNQ99608 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDNQ99608 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDNQ99608 SBF1P1-201ENST00000444527 5631 ntBASIC15.29■□□□□ 0.04
NDNQ99608 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NDNQ99608 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDNQ99608 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NDNQ99608 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.29■□□□□ 0.04
NDNQ99608 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDNQ99608 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDNQ99608 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.29■□□□□ 0.04
NDNQ99608 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.29■□□□□ 0.04
NDNQ99608 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
NDNQ99608 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NDNQ99608 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
NDNQ99608 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NDNQ99608 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.29■□□□□ 0.04
NDNQ99608 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
NDNQ99608 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
NDNQ99608 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NDNQ99608 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.29■□□□□ 0.04
NDNQ99608 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.29■□□□□ 0.04
NDNQ99608 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.29■□□□□ 0.04
NDNQ99608 AC004890.2-204ENST00000481968 304 ntBASIC15.29■□□□□ 0.04
NDNQ99608 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.29■□□□□ 0.04
NDNQ99608 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDNQ99608 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.29■□□□□ 0.04
NDNQ99608 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.29■□□□□ 0.04
NDNQ99608 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.29■□□□□ 0.04
NDNQ99608 AC000095.1-201ENST00000603208 874 ntBASIC15.29■□□□□ 0.04
NDNQ99608 AC004790.1-201ENST00000612686 536 ntBASIC15.29■□□□□ 0.04
NDNQ99608 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.29■□□□□ 0.04
NDNQ99608 INTS4P1-203ENST00000641008 3683 ntBASIC15.29■□□□□ 0.04
NDNQ99608 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDNQ99608 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDNQ99608 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
NDNQ99608 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NDNQ99608 AL390755.1-201ENST00000623716 2027 ntBASIC15.29■□□□□ 0.04
NDNQ99608 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDNQ99608 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NDNQ99608 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDNQ99608 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDNQ99608 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDNQ99608 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
NDNQ99608 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NDNQ99608 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NDNQ99608 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
NDNQ99608 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.28■□□□□ 0.04
NDNQ99608 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NDNQ99608 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NDNQ99608 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
NDNQ99608 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.28■□□□□ 0.04
NDNQ99608 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
NDNQ99608 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NDNQ99608 CLK3P2-201ENST00000427566 1453 ntBASIC15.28■□□□□ 0.04
NDNQ99608 AC012508.2-201ENST00000567613 1472 ntBASIC15.28■□□□□ 0.04
NDNQ99608 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
NDNQ99608 CICP8-201ENST00000455800 2813 ntBASIC15.28■□□□□ 0.04
NDNQ99608 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NDNQ99608 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NDNQ99608 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NDNQ99608 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NDNQ99608 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NDNQ99608 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.28■□□□□ 0.04
NDNQ99608 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NDNQ99608 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NDNQ99608 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.28■□□□□ 0.04
NDNQ99608 AC104794.3-201ENST00000566840 1248 ntBASIC15.28■□□□□ 0.04
NDNQ99608 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NDNQ99608 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.28■□□□□ 0.04
NDNQ99608 AC006538.3-201ENST00000612495 578 ntBASIC15.28■□□□□ 0.04
NDNQ99608 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NDNQ99608 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms