Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CDK5RAP2Q96SN8 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.45■□□□□ 0.38
CDK5RAP2Q96SN8 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDK5RAP2Q96SN8 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDK5RAP2Q96SN8 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDK5RAP2Q96SN8 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDK5RAP2Q96SN8 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC17.45■□□□□ 0.38
CDK5RAP2Q96SN8 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC17.45■□□□□ 0.38
CDK5RAP2Q96SN8 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDK5RAP2Q96SN8 MVK-214ENST00000629016 1591 ntTSL 5 BASIC17.44■□□□□ 0.38
CDK5RAP2Q96SN8 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDK5RAP2Q96SN8 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
CDK5RAP2Q96SN8 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDK5RAP2Q96SN8 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDK5RAP2Q96SN8 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC17.44■□□□□ 0.38
CDK5RAP2Q96SN8 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CDK5RAP2Q96SN8 AC015909.3-201ENST00000572855 1794 ntBASIC17.44■□□□□ 0.38
CDK5RAP2Q96SN8 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDK5RAP2Q96SN8 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CDK5RAP2Q96SN8 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDK5RAP2Q96SN8 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDK5RAP2Q96SN8 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDK5RAP2Q96SN8 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDK5RAP2Q96SN8 RN7SL181P-201ENST00000462921 277 ntBASIC17.44■□□□□ 0.38
CDK5RAP2Q96SN8 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC17.44■□□□□ 0.38
CDK5RAP2Q96SN8 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CDK5RAP2Q96SN8 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDK5RAP2Q96SN8 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDK5RAP2Q96SN8 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDK5RAP2Q96SN8 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDK5RAP2Q96SN8 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC17.44■□□□□ 0.38
CDK5RAP2Q96SN8 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC17.44■□□□□ 0.38
CDK5RAP2Q96SN8 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC17.44■□□□□ 0.38
CDK5RAP2Q96SN8 AL136172.1-201ENST00000598590 1394 ntBASIC17.44■□□□□ 0.38
CDK5RAP2Q96SN8 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDK5RAP2Q96SN8 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDK5RAP2Q96SN8 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC17.44■□□□□ 0.38
CDK5RAP2Q96SN8 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDK5RAP2Q96SN8 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDK5RAP2Q96SN8 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CDK5RAP2Q96SN8 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CDK5RAP2Q96SN8 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
CDK5RAP2Q96SN8 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDK5RAP2Q96SN8 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDK5RAP2Q96SN8 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CDK5RAP2Q96SN8 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDK5RAP2Q96SN8 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDK5RAP2Q96SN8 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDK5RAP2Q96SN8 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC17.44■□□□□ 0.38
CDK5RAP2Q96SN8 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDK5RAP2Q96SN8 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CDK5RAP2Q96SN8 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC17.44■□□□□ 0.38
CDK5RAP2Q96SN8 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDK5RAP2Q96SN8 AL008707.1-201ENST00000422498 534 ntBASIC17.44■□□□□ 0.38
CDK5RAP2Q96SN8 GAS5-209ENST00000430245 723 ntTSL 3 BASIC17.44■□□□□ 0.38
CDK5RAP2Q96SN8 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC17.44■□□□□ 0.38
CDK5RAP2Q96SN8 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDK5RAP2Q96SN8 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDK5RAP2Q96SN8 SCARNA21-201ENST00000517026 139 ntBASIC17.44■□□□□ 0.38
CDK5RAP2Q96SN8 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC17.44■□□□□ 0.38
CDK5RAP2Q96SN8 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC17.44■□□□□ 0.38
CDK5RAP2Q96SN8 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
CDK5RAP2Q96SN8 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDK5RAP2Q96SN8 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDK5RAP2Q96SN8 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDK5RAP2Q96SN8 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDK5RAP2Q96SN8 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17.43■□□□□ 0.38
CDK5RAP2Q96SN8 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDK5RAP2Q96SN8 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDK5RAP2Q96SN8 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC17.43■□□□□ 0.38
CDK5RAP2Q96SN8 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CDK5RAP2Q96SN8 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDK5RAP2Q96SN8 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CDK5RAP2Q96SN8 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC17.43■□□□□ 0.38
CDK5RAP2Q96SN8 KRT8P31-201ENST00000504812 1408 ntBASIC17.43■□□□□ 0.38
CDK5RAP2Q96SN8 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.43■□□□□ 0.38
CDK5RAP2Q96SN8 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDK5RAP2Q96SN8 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDK5RAP2Q96SN8 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDK5RAP2Q96SN8 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDK5RAP2Q96SN8 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDK5RAP2Q96SN8 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC17.43■□□□□ 0.38
CDK5RAP2Q96SN8 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDK5RAP2Q96SN8 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDK5RAP2Q96SN8 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDK5RAP2Q96SN8 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC17.43■□□□□ 0.38
CDK5RAP2Q96SN8 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC17.43■□□□□ 0.38
CDK5RAP2Q96SN8 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC17.43■□□□□ 0.38
CDK5RAP2Q96SN8 RN7SL769P-201ENST00000469386 295 ntBASIC17.43■□□□□ 0.38
CDK5RAP2Q96SN8 TMEM198B-204ENST00000484016 896 ntBASIC17.43■□□□□ 0.38
CDK5RAP2Q96SN8 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC17.43■□□□□ 0.38
CDK5RAP2Q96SN8 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC17.43■□□□□ 0.38
CDK5RAP2Q96SN8 PAM16-211ENST00000575848 518 ntTSL 3 BASIC17.43■□□□□ 0.38
CDK5RAP2Q96SN8 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CDK5RAP2Q96SN8 HCG18-245ENST00000602550 559 ntTSL 4 BASIC17.43■□□□□ 0.38
CDK5RAP2Q96SN8 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDK5RAP2Q96SN8 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC17.43■□□□□ 0.38
CDK5RAP2Q96SN8 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDK5RAP2Q96SN8 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC17.43■□□□□ 0.38
CDK5RAP2Q96SN8 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms