Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
VPS33AQ96AX1 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
VPS33AQ96AX1 AC104457.1-201ENST00000401024 814 ntBASIC14.65□□□□□ -0.06
VPS33AQ96AX1 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.65□□□□□ -0.06
VPS33AQ96AX1 AL080243.2-201ENST00000418783 582 ntBASIC14.65□□□□□ -0.06
VPS33AQ96AX1 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.65□□□□□ -0.06
VPS33AQ96AX1 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.65□□□□□ -0.06
VPS33AQ96AX1 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.65□□□□□ -0.06
VPS33AQ96AX1 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.65□□□□□ -0.06
VPS33AQ96AX1 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
VPS33AQ96AX1 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
VPS33AQ96AX1 LINC01115-203ENST00000606068 577 ntBASIC14.65□□□□□ -0.06
VPS33AQ96AX1 MIR6080-201ENST00000617359 66 ntBASIC14.65□□□□□ -0.06
VPS33AQ96AX1 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
VPS33AQ96AX1 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.65□□□□□ -0.06
VPS33AQ96AX1 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
VPS33AQ96AX1 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
VPS33AQ96AX1 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
VPS33AQ96AX1 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.65□□□□□ -0.06
VPS33AQ96AX1 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.65□□□□□ -0.06
VPS33AQ96AX1 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VPS33AQ96AX1 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
VPS33AQ96AX1 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VPS33AQ96AX1 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.65□□□□□ -0.06
VPS33AQ96AX1 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.65□□□□□ -0.06
VPS33AQ96AX1 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.65□□□□□ -0.06
VPS33AQ96AX1 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
VPS33AQ96AX1 AC005252.3-201ENST00000623855 2258 ntBASIC14.64□□□□□ -0.07
VPS33AQ96AX1 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
VPS33AQ96AX1 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
VPS33AQ96AX1 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VPS33AQ96AX1 AC136759.1-202ENST00000530858 2194 ntBASIC14.64□□□□□ -0.07
VPS33AQ96AX1 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VPS33AQ96AX1 AC138969.3-201ENST00000546612 1459 ntBASIC14.64□□□□□ -0.07
VPS33AQ96AX1 AC138932.2-201ENST00000548268 1459 ntBASIC14.64□□□□□ -0.07
VPS33AQ96AX1 AC126755.4-201ENST00000549796 1459 ntBASIC14.64□□□□□ -0.07
VPS33AQ96AX1 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
VPS33AQ96AX1 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
VPS33AQ96AX1 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
VPS33AQ96AX1 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.64□□□□□ -0.07
VPS33AQ96AX1 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
VPS33AQ96AX1 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
VPS33AQ96AX1 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
VPS33AQ96AX1 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.64□□□□□ -0.07
VPS33AQ96AX1 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
VPS33AQ96AX1 AC015922.1-201ENST00000421102 1152 ntBASIC14.64□□□□□ -0.07
VPS33AQ96AX1 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.64□□□□□ -0.07
VPS33AQ96AX1 RPL13P2-201ENST00000440687 659 ntBASIC14.64□□□□□ -0.07
VPS33AQ96AX1 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.64□□□□□ -0.07
VPS33AQ96AX1 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.64□□□□□ -0.07
VPS33AQ96AX1 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
VPS33AQ96AX1 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
VPS33AQ96AX1 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
VPS33AQ96AX1 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
VPS33AQ96AX1 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.64□□□□□ -0.07
VPS33AQ96AX1 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.64□□□□□ -0.07
VPS33AQ96AX1 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC14.64□□□□□ -0.07
VPS33AQ96AX1 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
VPS33AQ96AX1 AL033527.5-202ENST00000641632 1098 ntBASIC14.64□□□□□ -0.07
VPS33AQ96AX1 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VPS33AQ96AX1 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.64□□□□□ -0.07
VPS33AQ96AX1 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VPS33AQ96AX1 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.64□□□□□ -0.07
VPS33AQ96AX1 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
VPS33AQ96AX1 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VPS33AQ96AX1 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
VPS33AQ96AX1 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.64□□□□□ -0.07
VPS33AQ96AX1 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VPS33AQ96AX1 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.64□□□□□ -0.07
VPS33AQ96AX1 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
VPS33AQ96AX1 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VPS33AQ96AX1 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VPS33AQ96AX1 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
VPS33AQ96AX1 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
VPS33AQ96AX1 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VPS33AQ96AX1 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.63□□□□□ -0.07
VPS33AQ96AX1 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
VPS33AQ96AX1 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VPS33AQ96AX1 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VPS33AQ96AX1 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VPS33AQ96AX1 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VPS33AQ96AX1 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.63□□□□□ -0.07
VPS33AQ96AX1 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VPS33AQ96AX1 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VPS33AQ96AX1 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
VPS33AQ96AX1 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VPS33AQ96AX1 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.63□□□□□ -0.07
VPS33AQ96AX1 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VPS33AQ96AX1 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VPS33AQ96AX1 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VPS33AQ96AX1 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VPS33AQ96AX1 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
VPS33AQ96AX1 AL121723.1-201ENST00000445194 1519 ntBASIC14.63□□□□□ -0.07
VPS33AQ96AX1 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.63□□□□□ -0.07
VPS33AQ96AX1 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VPS33AQ96AX1 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
VPS33AQ96AX1 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.63□□□□□ -0.07
VPS33AQ96AX1 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
VPS33AQ96AX1 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VPS33AQ96AX1 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms