Protein–RNA interactions for Protein: Q8N9Q2

SREK1IP1, Protein SREK1IP1, humanhuman

Predicted RBP Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1IP1Q8N9Q2 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
SREK1IP1Q8N9Q2 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SREK1IP1Q8N9Q2 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC12.6□□□□□ -0.39
SREK1IP1Q8N9Q2 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SREK1IP1Q8N9Q2 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC12.6□□□□□ -0.39
SREK1IP1Q8N9Q2 MMAA-201ENST00000281317 7068 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
SREK1IP1Q8N9Q2 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
SREK1IP1Q8N9Q2 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SREK1IP1Q8N9Q2 ZNF148-205ENST00000484491 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SREK1IP1Q8N9Q2 POM121L9P-201ENST00000414583 5018 ntTSL 2 BASIC12.6□□□□□ -0.39
SREK1IP1Q8N9Q2 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SREK1IP1Q8N9Q2 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SREK1IP1Q8N9Q2 DAXX-202ENST00000374542 2613 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SREK1IP1Q8N9Q2 GRIN2A-206ENST00000562109 4338 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SREK1IP1Q8N9Q2 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
SREK1IP1Q8N9Q2 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
SREK1IP1Q8N9Q2 NLRP2-208ENST00000448584 3573 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
SREK1IP1Q8N9Q2 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC12.59□□□□□ -0.39
SREK1IP1Q8N9Q2 FOXN3-219ENST00000615335 2421 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
SREK1IP1Q8N9Q2 KCNMA1-241ENST00000638606 3852 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
SREK1IP1Q8N9Q2 KCNMA1-279ENST00000640182 3852 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
SREK1IP1Q8N9Q2 SPG11-201ENST00000261866 7774 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
SREK1IP1Q8N9Q2 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
SREK1IP1Q8N9Q2 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SREK1IP1Q8N9Q2 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SREK1IP1Q8N9Q2 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SREK1IP1Q8N9Q2 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SREK1IP1Q8N9Q2 SEC1P-202ENST00000473944 940 ntBASIC12.59□□□□□ -0.39
SREK1IP1Q8N9Q2 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC12.59□□□□□ -0.39
SREK1IP1Q8N9Q2 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC12.59□□□□□ -0.39
SREK1IP1Q8N9Q2 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC12.59□□□□□ -0.39
SREK1IP1Q8N9Q2 AL355075.4-201ENST00000554988 638 ntBASIC12.59□□□□□ -0.39
SREK1IP1Q8N9Q2 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC12.59□□□□□ -0.39
SREK1IP1Q8N9Q2 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
SREK1IP1Q8N9Q2 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC12.59□□□□□ -0.39
SREK1IP1Q8N9Q2 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC12.59□□□□□ -0.39
SREK1IP1Q8N9Q2 TFDP2-215ENST00000489671 9857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SREK1IP1Q8N9Q2 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
SREK1IP1Q8N9Q2 SHANK2-211ENST00000449833 8850 ntTSL 5 BASIC12.59□□□□□ -0.39
SREK1IP1Q8N9Q2 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SREK1IP1Q8N9Q2 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SREK1IP1Q8N9Q2 CUL5-201ENST00000393094 6351 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SREK1IP1Q8N9Q2 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC12.59□□□□□ -0.39
SREK1IP1Q8N9Q2 PAX5-201ENST00000358127 8615 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SREK1IP1Q8N9Q2 SLC1A2-208ENST00000606205 1890 ntTSL 2 BASIC12.59□□□□□ -0.39
SREK1IP1Q8N9Q2 CACUL1-201ENST00000369151 11311 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SREK1IP1Q8N9Q2 ADIRF-AS1-203ENST00000609111 3822 ntTSL 2 BASIC12.59□□□□□ -0.39
SREK1IP1Q8N9Q2 AC099521.2-201ENST00000619354 2036 ntBASIC12.59□□□□□ -0.39
SREK1IP1Q8N9Q2 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SREK1IP1Q8N9Q2 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
SREK1IP1Q8N9Q2 USP4-203ENST00000415188 1454 ntTSL 3 BASIC12.59□□□□□ -0.39
SREK1IP1Q8N9Q2 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
SREK1IP1Q8N9Q2 GDPD5-204ENST00000526177 4150 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SREK1IP1Q8N9Q2 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC12.58□□□□□ -0.39
SREK1IP1Q8N9Q2 TAOK2-201ENST00000279394 4246 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.39
SREK1IP1Q8N9Q2 PLEC-202ENST00000345136 14803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
SREK1IP1Q8N9Q2 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
SREK1IP1Q8N9Q2 AC021752.1-202ENST00000613161 2398 ntTSL 2 BASIC12.58□□□□□ -0.4
SREK1IP1Q8N9Q2 FOXN3-201ENST00000261302 2542 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
SREK1IP1Q8N9Q2 ZZEF1-201ENST00000381638 11456 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SREK1IP1Q8N9Q2 TRAF3-201ENST00000347662 7700 ntTSL 5 BASIC12.58□□□□□ -0.4
SREK1IP1Q8N9Q2 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC12.58□□□□□ -0.4
SREK1IP1Q8N9Q2 AL021920.2-201ENST00000624828 1351 ntBASIC12.58□□□□□ -0.4
SREK1IP1Q8N9Q2 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC12.58□□□□□ -0.4
SREK1IP1Q8N9Q2 MYO18B-202ENST00000407587 8090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SREK1IP1Q8N9Q2 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SREK1IP1Q8N9Q2 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC12.58□□□□□ -0.4
SREK1IP1Q8N9Q2 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SREK1IP1Q8N9Q2 ZFHX2-202ENST00000419474 9182 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
SREK1IP1Q8N9Q2 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
SREK1IP1Q8N9Q2 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
SREK1IP1Q8N9Q2 CEP170-203ENST00000366543 6727 ntTSL 5 BASIC12.58□□□□□ -0.4
SREK1IP1Q8N9Q2 ACSF3-201ENST00000317447 3664 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
SREK1IP1Q8N9Q2 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC12.58□□□□□ -0.4
SREK1IP1Q8N9Q2 PRR31-201ENST00000371629 978 ntTSL 2 BASIC12.58□□□□□ -0.4
SREK1IP1Q8N9Q2 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC12.58□□□□□ -0.4
SREK1IP1Q8N9Q2 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC12.58□□□□□ -0.4
SREK1IP1Q8N9Q2 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC12.58□□□□□ -0.4
SREK1IP1Q8N9Q2 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC12.58□□□□□ -0.4
SREK1IP1Q8N9Q2 RPS20-210ENST00000523936 899 ntTSL 2 BASIC12.58□□□□□ -0.4
SREK1IP1Q8N9Q2 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC12.58□□□□□ -0.4
SREK1IP1Q8N9Q2 AC024563.2-201ENST00000603282 481 ntBASIC12.58□□□□□ -0.4
SREK1IP1Q8N9Q2 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC12.58□□□□□ -0.4
SREK1IP1Q8N9Q2 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
SREK1IP1Q8N9Q2 GPR179-203ENST00000616987 7980 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SREK1IP1Q8N9Q2 ZDHHC7-201ENST00000313732 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SREK1IP1Q8N9Q2 CTRC-201ENST00000375943 3147 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SREK1IP1Q8N9Q2 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC12.58□□□□□ -0.4
SREK1IP1Q8N9Q2 SLC6A6-210ENST00000622186 6528 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SREK1IP1Q8N9Q2 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
SREK1IP1Q8N9Q2 AC006277.1-201ENST00000624348 1610 ntBASIC12.58□□□□□ -0.4
SREK1IP1Q8N9Q2 KRT89P-201ENST00000620027 1478 ntBASIC12.58□□□□□ -0.4
SREK1IP1Q8N9Q2 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SREK1IP1Q8N9Q2 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SREK1IP1Q8N9Q2 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
SREK1IP1Q8N9Q2 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SREK1IP1Q8N9Q2 SEPT9-201ENST00000329047 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SREK1IP1Q8N9Q2 AC007614.5-201ENST00000623424 8892 ntBASIC12.58□□□□□ -0.4
SREK1IP1Q8N9Q2 DNM3-208ENST00000627582 7625 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SREK1IP1Q8N9Q2 PTPRG-201ENST00000295874 4650 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms