Protein–RNA interactions for Protein: Q8N6Y2

LRRC17, Leucine-rich repeat-containing protein 17, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC17Q8N6Y2 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRRC17Q8N6Y2 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRRC17Q8N6Y2 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRRC17Q8N6Y2 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRRC17Q8N6Y2 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRRC17Q8N6Y2 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRRC17Q8N6Y2 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRRC17Q8N6Y2 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LRRC17Q8N6Y2 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRRC17Q8N6Y2 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
LRRC17Q8N6Y2 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
LRRC17Q8N6Y2 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
LRRC17Q8N6Y2 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.02□□□□□ -0.16
LRRC17Q8N6Y2 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LRRC17Q8N6Y2 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LRRC17Q8N6Y2 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
LRRC17Q8N6Y2 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LRRC17Q8N6Y2 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.02□□□□□ -0.16
LRRC17Q8N6Y2 AC013726.1-201ENST00000563747 2285 ntBASIC14.02□□□□□ -0.16
LRRC17Q8N6Y2 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LRRC17Q8N6Y2 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LRRC17Q8N6Y2 AP000845.1-201ENST00000581677 2131 ntBASIC14.02□□□□□ -0.16
LRRC17Q8N6Y2 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
LRRC17Q8N6Y2 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LRRC17Q8N6Y2 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LRRC17Q8N6Y2 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LRRC17Q8N6Y2 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LRRC17Q8N6Y2 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LRRC17Q8N6Y2 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
LRRC17Q8N6Y2 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LRRC17Q8N6Y2 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LRRC17Q8N6Y2 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LRRC17Q8N6Y2 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LRRC17Q8N6Y2 AL133267.1-201ENST00000398220 340 ntBASIC14.02□□□□□ -0.17
LRRC17Q8N6Y2 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LRRC17Q8N6Y2 AL844908.2-201ENST00000609461 460 ntBASIC14.02□□□□□ -0.17
LRRC17Q8N6Y2 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.02□□□□□ -0.17
LRRC17Q8N6Y2 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.02□□□□□ -0.17
LRRC17Q8N6Y2 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.02□□□□□ -0.17
LRRC17Q8N6Y2 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LRRC17Q8N6Y2 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.02□□□□□ -0.17
LRRC17Q8N6Y2 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LRRC17Q8N6Y2 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
LRRC17Q8N6Y2 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LRRC17Q8N6Y2 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LRRC17Q8N6Y2 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LRRC17Q8N6Y2 AC005912.2-201ENST00000619492 2400 ntBASIC14.02□□□□□ -0.17
LRRC17Q8N6Y2 AC005252.3-201ENST00000623855 2258 ntBASIC14.02□□□□□ -0.17
LRRC17Q8N6Y2 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LRRC17Q8N6Y2 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.02□□□□□ -0.17
LRRC17Q8N6Y2 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
LRRC17Q8N6Y2 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
LRRC17Q8N6Y2 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LRRC17Q8N6Y2 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.02□□□□□ -0.17
LRRC17Q8N6Y2 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.02□□□□□ -0.17
LRRC17Q8N6Y2 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
LRRC17Q8N6Y2 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
LRRC17Q8N6Y2 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
LRRC17Q8N6Y2 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LRRC17Q8N6Y2 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.01□□□□□ -0.17
LRRC17Q8N6Y2 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRRC17Q8N6Y2 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC14.01□□□□□ -0.17
LRRC17Q8N6Y2 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRRC17Q8N6Y2 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRRC17Q8N6Y2 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.01□□□□□ -0.17
LRRC17Q8N6Y2 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRRC17Q8N6Y2 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRRC17Q8N6Y2 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LRRC17Q8N6Y2 AL121723.1-201ENST00000445194 1519 ntBASIC14.01□□□□□ -0.17
LRRC17Q8N6Y2 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.01□□□□□ -0.17
LRRC17Q8N6Y2 FGD5P1-202ENST00000614866 2498 ntBASIC14.01□□□□□ -0.17
LRRC17Q8N6Y2 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
LRRC17Q8N6Y2 AC100757.3-201ENST00000622361 1406 ntBASIC14.01□□□□□ -0.17
LRRC17Q8N6Y2 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.01□□□□□ -0.17
LRRC17Q8N6Y2 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.01□□□□□ -0.17
LRRC17Q8N6Y2 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.01□□□□□ -0.17
LRRC17Q8N6Y2 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
LRRC17Q8N6Y2 AC087499.5-201ENST00000452760 1342 ntBASIC14.01□□□□□ -0.17
LRRC17Q8N6Y2 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.01□□□□□ -0.17
LRRC17Q8N6Y2 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.01□□□□□ -0.17
LRRC17Q8N6Y2 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
LRRC17Q8N6Y2 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.01□□□□□ -0.17
LRRC17Q8N6Y2 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.01□□□□□ -0.17
LRRC17Q8N6Y2 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.01□□□□□ -0.17
LRRC17Q8N6Y2 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.01□□□□□ -0.17
LRRC17Q8N6Y2 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.01□□□□□ -0.17
LRRC17Q8N6Y2 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.01□□□□□ -0.17
LRRC17Q8N6Y2 FAM86GP-201ENST00000448322 971 ntBASIC14.01□□□□□ -0.17
LRRC17Q8N6Y2 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.01□□□□□ -0.17
LRRC17Q8N6Y2 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.01□□□□□ -0.17
LRRC17Q8N6Y2 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.01□□□□□ -0.17
LRRC17Q8N6Y2 SDHAP3-202ENST00000515467 728 ntBASIC14.01□□□□□ -0.17
LRRC17Q8N6Y2 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.01□□□□□ -0.17
LRRC17Q8N6Y2 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
LRRC17Q8N6Y2 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.01□□□□□ -0.17
LRRC17Q8N6Y2 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.01□□□□□ -0.17
LRRC17Q8N6Y2 DUX4L27-201ENST00000554796 1261 ntBASIC14.01□□□□□ -0.17
LRRC17Q8N6Y2 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC14.01□□□□□ -0.17
LRRC17Q8N6Y2 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.01□□□□□ -0.17
LRRC17Q8N6Y2 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms