Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.37□□□□□ -0.11
CCDC116Q8IYX3 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.37□□□□□ -0.11
CCDC116Q8IYX3 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.37□□□□□ -0.11
CCDC116Q8IYX3 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.37□□□□□ -0.11
CCDC116Q8IYX3 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC116Q8IYX3 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.37□□□□□ -0.11
CCDC116Q8IYX3 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.37□□□□□ -0.11
CCDC116Q8IYX3 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.37□□□□□ -0.11
CCDC116Q8IYX3 AC007431.3-201ENST00000623221 587 ntBASIC14.37□□□□□ -0.11
CCDC116Q8IYX3 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC116Q8IYX3 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.37□□□□□ -0.11
CCDC116Q8IYX3 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC116Q8IYX3 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
CCDC116Q8IYX3 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC116Q8IYX3 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.37□□□□□ -0.11
CCDC116Q8IYX3 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CCDC116Q8IYX3 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC116Q8IYX3 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.37□□□□□ -0.11
CCDC116Q8IYX3 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC116Q8IYX3 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC116Q8IYX3 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.37□□□□□ -0.11
CCDC116Q8IYX3 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.37□□□□□ -0.11
CCDC116Q8IYX3 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CCDC116Q8IYX3 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.37□□□□□ -0.11
CCDC116Q8IYX3 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC116Q8IYX3 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
CCDC116Q8IYX3 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.37□□□□□ -0.11
CCDC116Q8IYX3 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC116Q8IYX3 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC116Q8IYX3 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC116Q8IYX3 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC116Q8IYX3 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CCDC116Q8IYX3 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.37□□□□□ -0.11
CCDC116Q8IYX3 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC116Q8IYX3 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC116Q8IYX3 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC116Q8IYX3 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CCDC116Q8IYX3 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC116Q8IYX3 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.36□□□□□ -0.11
CCDC116Q8IYX3 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.36□□□□□ -0.11
CCDC116Q8IYX3 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CCDC116Q8IYX3 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC116Q8IYX3 LILRP1-201ENST00000444199 1370 ntBASIC14.36□□□□□ -0.11
CCDC116Q8IYX3 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CCDC116Q8IYX3 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC116Q8IYX3 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC116Q8IYX3 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.36□□□□□ -0.11
CCDC116Q8IYX3 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC116Q8IYX3 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC116Q8IYX3 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CCDC116Q8IYX3 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC116Q8IYX3 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC116Q8IYX3 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.36□□□□□ -0.11
CCDC116Q8IYX3 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.36□□□□□ -0.11
CCDC116Q8IYX3 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.36□□□□□ -0.11
CCDC116Q8IYX3 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC116Q8IYX3 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.36□□□□□ -0.11
CCDC116Q8IYX3 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC14.36□□□□□ -0.11
CCDC116Q8IYX3 EMC4-208ENST00000559078 599 ntTSL 3 BASIC14.36□□□□□ -0.11
CCDC116Q8IYX3 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.36□□□□□ -0.11
CCDC116Q8IYX3 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.36□□□□□ -0.11
CCDC116Q8IYX3 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.36□□□□□ -0.11
CCDC116Q8IYX3 TMEM261P1-201ENST00000604899 340 ntBASIC14.36□□□□□ -0.11
CCDC116Q8IYX3 LINC01670-203ENST00000624859 977 ntTSL 3 BASIC14.36□□□□□ -0.11
CCDC116Q8IYX3 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
CCDC116Q8IYX3 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC116Q8IYX3 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC116Q8IYX3 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC116Q8IYX3 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.36□□□□□ -0.11
CCDC116Q8IYX3 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC116Q8IYX3 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.36□□□□□ -0.11
CCDC116Q8IYX3 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.36□□□□□ -0.11
CCDC116Q8IYX3 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC116Q8IYX3 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC116Q8IYX3 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.36□□□□□ -0.11
CCDC116Q8IYX3 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC116Q8IYX3 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.36□□□□□ -0.11
CCDC116Q8IYX3 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CCDC116Q8IYX3 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC116Q8IYX3 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC116Q8IYX3 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CCDC116Q8IYX3 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC116Q8IYX3 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.35□□□□□ -0.11
CCDC116Q8IYX3 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC116Q8IYX3 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.35□□□□□ -0.11
CCDC116Q8IYX3 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC116Q8IYX3 RPL23A-204ENST00000422514 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC116Q8IYX3 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC116Q8IYX3 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC116Q8IYX3 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC116Q8IYX3 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC116Q8IYX3 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC14.35□□□□□ -0.11
CCDC116Q8IYX3 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CCDC116Q8IYX3 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC116Q8IYX3 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC116Q8IYX3 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC116Q8IYX3 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CCDC116Q8IYX3 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
CCDC116Q8IYX3 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.35□□□□□ -0.11
CCDC116Q8IYX3 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms