Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 FRMD6-AS1-201ENST00000617151 2229 ntBASIC18.64■□□□□ 0.57
COL23A1Q86Y22 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC18.63■□□□□ 0.57
COL23A1Q86Y22 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC18.63■□□□□ 0.57
COL23A1Q86Y22 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COL23A1Q86Y22 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL23A1Q86Y22 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
COL23A1Q86Y22 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL23A1Q86Y22 COX20P1-201ENST00000366529 357 ntBASIC18.63■□□□□ 0.57
COL23A1Q86Y22 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC18.63■□□□□ 0.57
COL23A1Q86Y22 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC18.63■□□□□ 0.57
COL23A1Q86Y22 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC18.63■□□□□ 0.57
COL23A1Q86Y22 TLE1P1-201ENST00000422965 589 ntBASIC18.63■□□□□ 0.57
COL23A1Q86Y22 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COL23A1Q86Y22 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL23A1Q86Y22 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC18.63■□□□□ 0.57
COL23A1Q86Y22 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
COL23A1Q86Y22 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC18.63■□□□□ 0.57
COL23A1Q86Y22 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC18.63■□□□□ 0.57
COL23A1Q86Y22 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COL23A1Q86Y22 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL23A1Q86Y22 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL23A1Q86Y22 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
COL23A1Q86Y22 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
COL23A1Q86Y22 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
COL23A1Q86Y22 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL23A1Q86Y22 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL23A1Q86Y22 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL23A1Q86Y22 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.62■□□□□ 0.57
COL23A1Q86Y22 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL23A1Q86Y22 AC013726.1-201ENST00000563747 2285 ntBASIC18.62■□□□□ 0.57
COL23A1Q86Y22 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL23A1Q86Y22 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL23A1Q86Y22 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
COL23A1Q86Y22 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL23A1Q86Y22 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COL23A1Q86Y22 HERC2P11-201ENST00000562845 725 ntBASIC18.62■□□□□ 0.57
COL23A1Q86Y22 AC100756.2-201ENST00000569537 736 ntBASIC18.62■□□□□ 0.57
COL23A1Q86Y22 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC18.62■□□□□ 0.57
COL23A1Q86Y22 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COL23A1Q86Y22 AC055811.3-201ENST00000584952 686 ntBASIC18.62■□□□□ 0.57
COL23A1Q86Y22 NAMA-206ENST00000605377 509 ntTSL 5 BASIC18.62■□□□□ 0.57
COL23A1Q86Y22 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC18.62■□□□□ 0.57
COL23A1Q86Y22 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
COL23A1Q86Y22 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL23A1Q86Y22 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC18.62■□□□□ 0.57
COL23A1Q86Y22 ZBED1P1-201ENST00000502364 1930 ntBASIC18.62■□□□□ 0.57
COL23A1Q86Y22 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL23A1Q86Y22 API5-202ENST00000420461 2009 ntTSL 2 BASIC18.62■□□□□ 0.57
COL23A1Q86Y22 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL23A1Q86Y22 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
COL23A1Q86Y22 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL23A1Q86Y22 ACE-204ENST00000428043 5120 ntTSL 2 BASIC18.61■□□□□ 0.57
COL23A1Q86Y22 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL23A1Q86Y22 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL23A1Q86Y22 AC007292.2-201ENST00000593524 1812 ntBASIC18.61■□□□□ 0.57
COL23A1Q86Y22 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
COL23A1Q86Y22 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL23A1Q86Y22 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
COL23A1Q86Y22 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC18.61■□□□□ 0.57
COL23A1Q86Y22 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL23A1Q86Y22 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL23A1Q86Y22 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL23A1Q86Y22 MRPL37P1-201ENST00000592451 1337 ntBASIC18.61■□□□□ 0.57
COL23A1Q86Y22 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL23A1Q86Y22 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
COL23A1Q86Y22 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC18.61■□□□□ 0.57
COL23A1Q86Y22 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC18.61■□□□□ 0.57
COL23A1Q86Y22 OR2R1P-201ENST00000441404 914 ntBASIC18.61■□□□□ 0.57
COL23A1Q86Y22 GCOM2-201ENST00000509133 1104 ntBASIC18.61■□□□□ 0.57
COL23A1Q86Y22 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC18.61■□□□□ 0.57
COL23A1Q86Y22 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC18.61■□□□□ 0.57
COL23A1Q86Y22 AC027139.1-201ENST00000565286 951 ntBASIC18.61■□□□□ 0.57
COL23A1Q86Y22 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL23A1Q86Y22 THY1-209ENST00000580275 578 ntTSL 3 BASIC18.61■□□□□ 0.57
COL23A1Q86Y22 AL022334.2-201ENST00000610000 484 ntBASIC18.61■□□□□ 0.57
COL23A1Q86Y22 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL23A1Q86Y22 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL23A1Q86Y22 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL23A1Q86Y22 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC18.61■□□□□ 0.57
COL23A1Q86Y22 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL23A1Q86Y22 GCK-209ENST00000616242 2260 ntTSL 5 BASIC18.61■□□□□ 0.57
COL23A1Q86Y22 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL23A1Q86Y22 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
COL23A1Q86Y22 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL23A1Q86Y22 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
COL23A1Q86Y22 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL23A1Q86Y22 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COL23A1Q86Y22 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL23A1Q86Y22 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL23A1Q86Y22 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL23A1Q86Y22 AC012508.2-201ENST00000567613 1472 ntBASIC18.6■□□□□ 0.57
COL23A1Q86Y22 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC18.6■□□□□ 0.57
COL23A1Q86Y22 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
COL23A1Q86Y22 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC18.6■□□□□ 0.57
COL23A1Q86Y22 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COL23A1Q86Y22 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COL23A1Q86Y22 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL23A1Q86Y22 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC18.6■□□□□ 0.57
COL23A1Q86Y22 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC18.6■□□□□ 0.57
COL23A1Q86Y22 PGAM1P12-201ENST00000505622 748 ntBASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms