Protein–RNA interactions for Protein: Q52LD8

RFTN2, Raftlin-2, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN2Q52LD8 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFTN2Q52LD8 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFTN2Q52LD8 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.63□□□□□ -0.07
RFTN2Q52LD8 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFTN2Q52LD8 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.63□□□□□ -0.07
RFTN2Q52LD8 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RFTN2Q52LD8 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.63□□□□□ -0.07
RFTN2Q52LD8 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFTN2Q52LD8 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFTN2Q52LD8 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.63□□□□□ -0.07
RFTN2Q52LD8 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.63□□□□□ -0.07
RFTN2Q52LD8 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
RFTN2Q52LD8 BTBD7P1-201ENST00000447253 1453 ntBASIC14.63□□□□□ -0.07
RFTN2Q52LD8 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RFTN2Q52LD8 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RFTN2Q52LD8 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RFTN2Q52LD8 AC027601.5-201ENST00000624065 2482 ntBASIC14.63□□□□□ -0.07
RFTN2Q52LD8 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFTN2Q52LD8 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
RFTN2Q52LD8 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.62□□□□□ -0.07
RFTN2Q52LD8 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RFTN2Q52LD8 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RFTN2Q52LD8 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RFTN2Q52LD8 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RFTN2Q52LD8 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
RFTN2Q52LD8 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
RFTN2Q52LD8 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RFTN2Q52LD8 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
RFTN2Q52LD8 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RFTN2Q52LD8 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.62□□□□□ -0.07
RFTN2Q52LD8 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RFTN2Q52LD8 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RFTN2Q52LD8 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RFTN2Q52LD8 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RFTN2Q52LD8 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RFTN2Q52LD8 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
RFTN2Q52LD8 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.62□□□□□ -0.07
RFTN2Q52LD8 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.62□□□□□ -0.07
RFTN2Q52LD8 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.62□□□□□ -0.07
RFTN2Q52LD8 SPDYE18-201ENST00000510091 1050 ntBASIC14.62□□□□□ -0.07
RFTN2Q52LD8 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RFTN2Q52LD8 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.62□□□□□ -0.07
RFTN2Q52LD8 DUX4L27-201ENST00000554796 1261 ntBASIC14.62□□□□□ -0.07
RFTN2Q52LD8 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RFTN2Q52LD8 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RFTN2Q52LD8 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.62□□□□□ -0.07
RFTN2Q52LD8 AP001160.2-201ENST00000596071 487 ntBASIC14.62□□□□□ -0.07
RFTN2Q52LD8 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.62□□□□□ -0.07
RFTN2Q52LD8 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
RFTN2Q52LD8 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
RFTN2Q52LD8 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RFTN2Q52LD8 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RFTN2Q52LD8 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.62□□□□□ -0.07
RFTN2Q52LD8 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RFTN2Q52LD8 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.62□□□□□ -0.07
RFTN2Q52LD8 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.62□□□□□ -0.07
RFTN2Q52LD8 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
RFTN2Q52LD8 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RFTN2Q52LD8 SBF1P1-201ENST00000444527 5631 ntBASIC14.62□□□□□ -0.07
RFTN2Q52LD8 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RFTN2Q52LD8 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.61□□□□□ -0.07
RFTN2Q52LD8 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RFTN2Q52LD8 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
RFTN2Q52LD8 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.61□□□□□ -0.07
RFTN2Q52LD8 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RFTN2Q52LD8 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RFTN2Q52LD8 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RFTN2Q52LD8 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
RFTN2Q52LD8 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RFTN2Q52LD8 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RFTN2Q52LD8 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RFTN2Q52LD8 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.61□□□□□ -0.07
RFTN2Q52LD8 GRK6P1-201ENST00000400595 1711 ntBASIC14.61□□□□□ -0.07
RFTN2Q52LD8 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RFTN2Q52LD8 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
RFTN2Q52LD8 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RFTN2Q52LD8 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.61□□□□□ -0.07
RFTN2Q52LD8 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.61□□□□□ -0.07
RFTN2Q52LD8 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.61□□□□□ -0.07
RFTN2Q52LD8 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RFTN2Q52LD8 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
RFTN2Q52LD8 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RFTN2Q52LD8 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
RFTN2Q52LD8 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
RFTN2Q52LD8 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.61□□□□□ -0.07
RFTN2Q52LD8 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RFTN2Q52LD8 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.61□□□□□ -0.07
RFTN2Q52LD8 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RFTN2Q52LD8 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RFTN2Q52LD8 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.61□□□□□ -0.07
RFTN2Q52LD8 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.61□□□□□ -0.07
RFTN2Q52LD8 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.61□□□□□ -0.07
RFTN2Q52LD8 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.61□□□□□ -0.07
RFTN2Q52LD8 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RFTN2Q52LD8 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.61□□□□□ -0.07
RFTN2Q52LD8 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.61□□□□□ -0.07
RFTN2Q52LD8 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RFTN2Q52LD8 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RFTN2Q52LD8 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.61□□□□□ -0.07
RFTN2Q52LD8 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms