Protein–RNA interactions for Protein: Q12988

HSPB3, Heat shock protein beta-3, humanhuman

Predictions only

Length 150 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPB3Q12988 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.39□□□□□ -0.11
HSPB3Q12988 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.39□□□□□ -0.11
HSPB3Q12988 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.39□□□□□ -0.11
HSPB3Q12988 UGT1A2P-201ENST00000454886 866 ntBASIC14.39□□□□□ -0.11
HSPB3Q12988 GAPDHP40-201ENST00000505218 1006 ntBASIC14.39□□□□□ -0.11
HSPB3Q12988 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.39□□□□□ -0.11
HSPB3Q12988 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.39□□□□□ -0.11
HSPB3Q12988 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.39□□□□□ -0.11
HSPB3Q12988 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HSPB3Q12988 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HSPB3Q12988 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HSPB3Q12988 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
HSPB3Q12988 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HSPB3Q12988 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
HSPB3Q12988 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.39□□□□□ -0.11
HSPB3Q12988 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
HSPB3Q12988 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
HSPB3Q12988 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.39□□□□□ -0.11
HSPB3Q12988 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.39□□□□□ -0.11
HSPB3Q12988 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.39□□□□□ -0.11
HSPB3Q12988 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HSPB3Q12988 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HSPB3Q12988 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.39□□□□□ -0.11
HSPB3Q12988 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
HSPB3Q12988 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HSPB3Q12988 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HSPB3Q12988 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
HSPB3Q12988 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HSPB3Q12988 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HSPB3Q12988 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
HSPB3Q12988 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HSPB3Q12988 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HSPB3Q12988 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HSPB3Q12988 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HSPB3Q12988 AC018529.2-202ENST00000611482 3087 ntBASIC14.38□□□□□ -0.11
HSPB3Q12988 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.38□□□□□ -0.11
HSPB3Q12988 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
HSPB3Q12988 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
HSPB3Q12988 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HSPB3Q12988 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.38□□□□□ -0.11
HSPB3Q12988 ST20-AS1-201ENST00000560255 4223 ntBASIC14.38□□□□□ -0.11
HSPB3Q12988 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HSPB3Q12988 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HSPB3Q12988 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HSPB3Q12988 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.38□□□□□ -0.11
HSPB3Q12988 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HSPB3Q12988 FAM45BP-202ENST00000592932 1624 ntBASIC14.38□□□□□ -0.11
HSPB3Q12988 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.38□□□□□ -0.11
HSPB3Q12988 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.38□□□□□ -0.11
HSPB3Q12988 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HSPB3Q12988 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HSPB3Q12988 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HSPB3Q12988 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
HSPB3Q12988 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.38□□□□□ -0.11
HSPB3Q12988 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
HSPB3Q12988 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HSPB3Q12988 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.38□□□□□ -0.11
HSPB3Q12988 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
HSPB3Q12988 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.38□□□□□ -0.11
HSPB3Q12988 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HSPB3Q12988 MEP1AP4-201ENST00000423244 1087 ntBASIC14.38□□□□□ -0.11
HSPB3Q12988 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.38□□□□□ -0.11
HSPB3Q12988 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HSPB3Q12988 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HSPB3Q12988 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HSPB3Q12988 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.38□□□□□ -0.11
HSPB3Q12988 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.38□□□□□ -0.11
HSPB3Q12988 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.38□□□□□ -0.11
HSPB3Q12988 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.38□□□□□ -0.11
HSPB3Q12988 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.38□□□□□ -0.11
HSPB3Q12988 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.38□□□□□ -0.11
HSPB3Q12988 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
HSPB3Q12988 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.38□□□□□ -0.11
HSPB3Q12988 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
HSPB3Q12988 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HSPB3Q12988 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.38□□□□□ -0.11
HSPB3Q12988 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.38□□□□□ -0.11
HSPB3Q12988 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
HSPB3Q12988 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HSPB3Q12988 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.38□□□□□ -0.11
HSPB3Q12988 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HSPB3Q12988 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
HSPB3Q12988 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
HSPB3Q12988 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
HSPB3Q12988 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HSPB3Q12988 AC139749.1-202ENST00000617529 3139 ntBASIC14.38□□□□□ -0.11
HSPB3Q12988 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HSPB3Q12988 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HSPB3Q12988 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HSPB3Q12988 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.38□□□□□ -0.11
HSPB3Q12988 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
HSPB3Q12988 AL360270.3-201ENST00000609118 1348 ntBASIC14.38□□□□□ -0.11
HSPB3Q12988 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.38□□□□□ -0.11
HSPB3Q12988 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.38□□□□□ -0.11
HSPB3Q12988 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.38□□□□□ -0.11
HSPB3Q12988 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HSPB3Q12988 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HSPB3Q12988 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HSPB3Q12988 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.37□□□□□ -0.11
HSPB3Q12988 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms