Protein–RNA interactions for Protein: Q08554

DSC1, Desmocollin-1, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DSC1Q08554 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
DSC1Q08554 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
DSC1Q08554 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
DSC1Q08554 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
DSC1Q08554 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
DSC1Q08554 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
DSC1Q08554 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
DSC1Q08554 AC092506.1-202ENST00000401022 528 ntBASIC15.93■□□□□ 0.14
DSC1Q08554 SKA2-202ENST00000437036 625 ntTSL 2 BASIC15.93■□□□□ 0.14
DSC1Q08554 MSRA-203ENST00000441698 788 ntTSL 2 BASIC15.93■□□□□ 0.14
DSC1Q08554 AL133466.1-201ENST00000447582 150 ntBASIC15.93■□□□□ 0.14
DSC1Q08554 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC15.93■□□□□ 0.14
DSC1Q08554 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC15.93■□□□□ 0.14
DSC1Q08554 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC15.93■□□□□ 0.14
DSC1Q08554 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC15.93■□□□□ 0.14
DSC1Q08554 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.93■□□□□ 0.14
DSC1Q08554 AC079328.1-201ENST00000560358 952 ntBASIC15.93■□□□□ 0.14
DSC1Q08554 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC15.93■□□□□ 0.14
DSC1Q08554 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC15.93■□□□□ 0.14
DSC1Q08554 AC016629.1-201ENST00000596579 586 ntBASIC15.93■□□□□ 0.14
DSC1Q08554 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC15.93■□□□□ 0.14
DSC1Q08554 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC15.93■□□□□ 0.14
DSC1Q08554 RPL35-206ENST00000629845 340 ntTSL 5 BASIC15.93■□□□□ 0.14
DSC1Q08554 AL162727.3-201ENST00000635661 2787 ntBASIC15.93■□□□□ 0.14
DSC1Q08554 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
DSC1Q08554 ZBED1P1-201ENST00000502364 1930 ntBASIC15.93■□□□□ 0.14
DSC1Q08554 AC007292.2-201ENST00000593524 1812 ntBASIC15.93■□□□□ 0.14
DSC1Q08554 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
DSC1Q08554 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.93■□□□□ 0.14
DSC1Q08554 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
DSC1Q08554 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
DSC1Q08554 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.93■□□□□ 0.14
DSC1Q08554 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
DSC1Q08554 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC15.93■□□□□ 0.14
DSC1Q08554 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
DSC1Q08554 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC15.93■□□□□ 0.14
DSC1Q08554 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
DSC1Q08554 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
DSC1Q08554 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
DSC1Q08554 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
DSC1Q08554 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
DSC1Q08554 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15.92■□□□□ 0.14
DSC1Q08554 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.92■□□□□ 0.14
DSC1Q08554 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.92■□□□□ 0.14
DSC1Q08554 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
DSC1Q08554 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
DSC1Q08554 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
DSC1Q08554 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.92■□□□□ 0.14
DSC1Q08554 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.92■□□□□ 0.14
DSC1Q08554 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.92■□□□□ 0.14
DSC1Q08554 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
DSC1Q08554 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
DSC1Q08554 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
DSC1Q08554 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
DSC1Q08554 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.92■□□□□ 0.14
DSC1Q08554 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
DSC1Q08554 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
DSC1Q08554 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.92■□□□□ 0.14
DSC1Q08554 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
DSC1Q08554 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
DSC1Q08554 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
DSC1Q08554 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
DSC1Q08554 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
DSC1Q08554 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
DSC1Q08554 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
DSC1Q08554 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC15.92■□□□□ 0.14
DSC1Q08554 AL157407.1-201ENST00000435784 904 ntBASIC15.92■□□□□ 0.14
DSC1Q08554 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC15.92■□□□□ 0.14
DSC1Q08554 Z97180.1-201ENST00000445173 988 ntBASIC15.92■□□□□ 0.14
DSC1Q08554 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC15.92■□□□□ 0.14
DSC1Q08554 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC15.92■□□□□ 0.14
DSC1Q08554 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC15.92■□□□□ 0.14
DSC1Q08554 SCARNA21-201ENST00000517026 139 ntBASIC15.92■□□□□ 0.14
DSC1Q08554 FOS-206ENST00000555347 1280 ntTSL 2 BASIC15.92■□□□□ 0.14
DSC1Q08554 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC15.92■□□□□ 0.14
DSC1Q08554 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
DSC1Q08554 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC15.92■□□□□ 0.14
DSC1Q08554 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC15.92■□□□□ 0.14
DSC1Q08554 AC027601.3-201ENST00000622907 509 ntBASIC15.92■□□□□ 0.14
DSC1Q08554 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
DSC1Q08554 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
DSC1Q08554 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC15.92■□□□□ 0.14
DSC1Q08554 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.92■□□□□ 0.14
DSC1Q08554 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.92■□□□□ 0.14
DSC1Q08554 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.92■□□□□ 0.14
DSC1Q08554 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
DSC1Q08554 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC15.92■□□□□ 0.14
DSC1Q08554 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
DSC1Q08554 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
DSC1Q08554 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.92■□□□□ 0.14
DSC1Q08554 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
DSC1Q08554 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC15.92■□□□□ 0.14
DSC1Q08554 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
DSC1Q08554 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
DSC1Q08554 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.92■□□□□ 0.14
DSC1Q08554 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
DSC1Q08554 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
DSC1Q08554 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.92■□□□□ 0.14
DSC1Q08554 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
DSC1Q08554 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms