Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HMGCS1Q01581 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.67□□□□□ -0.06
HMGCS1Q01581 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HMGCS1Q01581 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.67□□□□□ -0.06
HMGCS1Q01581 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.67□□□□□ -0.06
HMGCS1Q01581 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.67□□□□□ -0.06
HMGCS1Q01581 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HMGCS1Q01581 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HMGCS1Q01581 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HMGCS1Q01581 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HMGCS1Q01581 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
HMGCS1Q01581 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
HMGCS1Q01581 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HMGCS1Q01581 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.67□□□□□ -0.06
HMGCS1Q01581 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HMGCS1Q01581 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HMGCS1Q01581 LINC01230-201ENST00000625222 3017 ntBASIC14.67□□□□□ -0.06
HMGCS1Q01581 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
HMGCS1Q01581 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HMGCS1Q01581 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
HMGCS1Q01581 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HMGCS1Q01581 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.66□□□□□ -0.06
HMGCS1Q01581 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.66□□□□□ -0.06
HMGCS1Q01581 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
HMGCS1Q01581 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.66□□□□□ -0.06
HMGCS1Q01581 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HMGCS1Q01581 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HMGCS1Q01581 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
HMGCS1Q01581 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
HMGCS1Q01581 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HMGCS1Q01581 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
HMGCS1Q01581 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HMGCS1Q01581 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
HMGCS1Q01581 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HMGCS1Q01581 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HMGCS1Q01581 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.66□□□□□ -0.06
HMGCS1Q01581 BASP1P1-201ENST00000430708 665 ntBASIC14.66□□□□□ -0.06
HMGCS1Q01581 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.66□□□□□ -0.06
HMGCS1Q01581 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HMGCS1Q01581 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.66□□□□□ -0.06
HMGCS1Q01581 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HMGCS1Q01581 FAM86LP-201ENST00000478302 853 ntBASIC14.66□□□□□ -0.06
HMGCS1Q01581 AC093214.1-201ENST00000511688 1107 ntBASIC14.66□□□□□ -0.06
HMGCS1Q01581 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.66□□□□□ -0.06
HMGCS1Q01581 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.66□□□□□ -0.06
HMGCS1Q01581 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.66□□□□□ -0.06
HMGCS1Q01581 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
HMGCS1Q01581 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.66□□□□□ -0.06
HMGCS1Q01581 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
HMGCS1Q01581 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
HMGCS1Q01581 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.66□□□□□ -0.06
HMGCS1Q01581 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HMGCS1Q01581 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.66□□□□□ -0.06
HMGCS1Q01581 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HMGCS1Q01581 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HMGCS1Q01581 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HMGCS1Q01581 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HMGCS1Q01581 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HMGCS1Q01581 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HMGCS1Q01581 DRD5P1-201ENST00000456605 1438 ntBASIC14.66□□□□□ -0.06
HMGCS1Q01581 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
HMGCS1Q01581 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.66□□□□□ -0.06
HMGCS1Q01581 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HMGCS1Q01581 AP001267.2-201ENST00000532619 2086 ntBASIC14.65□□□□□ -0.06
HMGCS1Q01581 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
HMGCS1Q01581 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
HMGCS1Q01581 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HMGCS1Q01581 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HMGCS1Q01581 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.65□□□□□ -0.06
HMGCS1Q01581 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HMGCS1Q01581 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
HMGCS1Q01581 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.65□□□□□ -0.06
HMGCS1Q01581 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.65□□□□□ -0.06
HMGCS1Q01581 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
HMGCS1Q01581 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.65□□□□□ -0.06
HMGCS1Q01581 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HMGCS1Q01581 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HMGCS1Q01581 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.65□□□□□ -0.06
HMGCS1Q01581 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
HMGCS1Q01581 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.65□□□□□ -0.06
HMGCS1Q01581 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.65□□□□□ -0.06
HMGCS1Q01581 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HMGCS1Q01581 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
HMGCS1Q01581 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
HMGCS1Q01581 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HMGCS1Q01581 AC113367.3-201ENST00000508316 1912 ntBASIC14.65□□□□□ -0.06
HMGCS1Q01581 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
HMGCS1Q01581 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
HMGCS1Q01581 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HMGCS1Q01581 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HMGCS1Q01581 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
HMGCS1Q01581 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.65□□□□□ -0.06
HMGCS1Q01581 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HMGCS1Q01581 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.65□□□□□ -0.06
HMGCS1Q01581 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.65□□□□□ -0.06
HMGCS1Q01581 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.65□□□□□ -0.06
HMGCS1Q01581 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.65□□□□□ -0.06
HMGCS1Q01581 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.65□□□□□ -0.06
HMGCS1Q01581 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.65□□□□□ -0.06
HMGCS1Q01581 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms