Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC17.08■□□□□ 0.32
TPM4P67936 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.08■□□□□ 0.32
TPM4P67936 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
TPM4P67936 IL9RP2-201ENST00000423948 1312 ntBASIC17.08■□□□□ 0.32
TPM4P67936 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.08■□□□□ 0.32
TPM4P67936 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TPM4P67936 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TPM4P67936 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TPM4P67936 AC069335.1-201ENST00000489972 472 ntBASIC17.08■□□□□ 0.32
TPM4P67936 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC17.08■□□□□ 0.32
TPM4P67936 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.08■□□□□ 0.32
TPM4P67936 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.08■□□□□ 0.32
TPM4P67936 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.08■□□□□ 0.32
TPM4P67936 AC018529.1-201ENST00000613063 361 ntBASIC17.08■□□□□ 0.32
TPM4P67936 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC17.08■□□□□ 0.32
TPM4P67936 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TPM4P67936 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TPM4P67936 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TPM4P67936 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TPM4P67936 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TPM4P67936 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TPM4P67936 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
TPM4P67936 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TPM4P67936 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC17.07■□□□□ 0.32
TPM4P67936 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TPM4P67936 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TPM4P67936 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
TPM4P67936 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC17.07■□□□□ 0.32
TPM4P67936 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.07■□□□□ 0.32
TPM4P67936 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TPM4P67936 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TPM4P67936 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TPM4P67936 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC17.07■□□□□ 0.32
TPM4P67936 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TPM4P67936 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TPM4P67936 YBX2P1-201ENST00000394192 760 ntBASIC17.07■□□□□ 0.32
TPM4P67936 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
TPM4P67936 AC009078.2-202ENST00000463353 338 ntBASIC17.07■□□□□ 0.32
TPM4P67936 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.07■□□□□ 0.32
TPM4P67936 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.07■□□□□ 0.32
TPM4P67936 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.07■□□□□ 0.32
TPM4P67936 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TPM4P67936 AC025181.2-201ENST00000606994 802 ntBASIC17.07■□□□□ 0.32
TPM4P67936 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
TPM4P67936 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TPM4P67936 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
TPM4P67936 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TPM4P67936 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TPM4P67936 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TPM4P67936 AC092135.3-201ENST00000624151 1846 ntBASIC17.07■□□□□ 0.32
TPM4P67936 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC17.07■□□□□ 0.32
TPM4P67936 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TPM4P67936 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TPM4P67936 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TPM4P67936 RET-205ENST00000615310 4337 ntTSL 5 BASIC17.07■□□□□ 0.32
TPM4P67936 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TPM4P67936 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TPM4P67936 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TPM4P67936 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TPM4P67936 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC17.07■□□□□ 0.32
TPM4P67936 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TPM4P67936 C1R-201ENST00000535233 2211 ntTSL 2 BASIC17.06■□□□□ 0.32
TPM4P67936 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TPM4P67936 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TPM4P67936 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TPM4P67936 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC17.06■□□□□ 0.32
TPM4P67936 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC17.06■□□□□ 0.32
TPM4P67936 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TPM4P67936 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
TPM4P67936 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TPM4P67936 AC152010.1-201ENST00000415779 2006 ntBASIC17.06■□□□□ 0.32
TPM4P67936 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC17.06■□□□□ 0.32
TPM4P67936 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TPM4P67936 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TPM4P67936 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TPM4P67936 KRT8P12-202ENST00000472924 1397 ntBASIC17.06■□□□□ 0.32
TPM4P67936 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TPM4P67936 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TPM4P67936 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC17.06■□□□□ 0.32
TPM4P67936 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
TPM4P67936 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC17.06■□□□□ 0.32
TPM4P67936 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TPM4P67936 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC17.06■□□□□ 0.32
TPM4P67936 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TPM4P67936 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TPM4P67936 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TPM4P67936 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TPM4P67936 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TPM4P67936 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TPM4P67936 AC104457.1-201ENST00000401024 814 ntBASIC17.06■□□□□ 0.32
TPM4P67936 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.06■□□□□ 0.32
TPM4P67936 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.06■□□□□ 0.32
TPM4P67936 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.06■□□□□ 0.32
TPM4P67936 ALG1L8P-201ENST00000533887 760 ntBASIC17.06■□□□□ 0.32
TPM4P67936 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.06■□□□□ 0.32
TPM4P67936 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.06■□□□□ 0.32
TPM4P67936 TBCB-211ENST00000589996 724 ntTSL 3 BASIC17.06■□□□□ 0.32
TPM4P67936 AC003101.2-201ENST00000612557 442 ntBASIC17.06■□□□□ 0.32
TPM4P67936 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC17.06■□□□□ 0.32
TPM4P67936 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms