Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.24■□□□□ 0.03
AP1S1P61966 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
AP1S1P61966 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.24■□□□□ 0.03
AP1S1P61966 AC006453.4-201ENST00000636949 1252 ntBASIC15.24■□□□□ 0.03
AP1S1P61966 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
AP1S1P61966 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP1S1P61966 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.24■□□□□ 0.03
AP1S1P61966 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
AP1S1P61966 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP1S1P61966 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.24■□□□□ 0.03
AP1S1P61966 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP1S1P61966 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
AP1S1P61966 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP1S1P61966 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
AP1S1P61966 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC15.24■□□□□ 0.03
AP1S1P61966 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.23■□□□□ 0.03
AP1S1P61966 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
AP1S1P61966 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.23■□□□□ 0.03
AP1S1P61966 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP1S1P61966 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.23■□□□□ 0.03
AP1S1P61966 AC023090.2-201ENST00000625182 2110 ntBASIC15.23■□□□□ 0.03
AP1S1P61966 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP1S1P61966 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP1S1P61966 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.23■□□□□ 0.03
AP1S1P61966 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
AP1S1P61966 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP1S1P61966 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
AP1S1P61966 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
AP1S1P61966 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
AP1S1P61966 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.23■□□□□ 0.03
AP1S1P61966 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP1S1P61966 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
AP1S1P61966 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
AP1S1P61966 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP1S1P61966 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP1S1P61966 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
AP1S1P61966 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP1S1P61966 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP1S1P61966 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP1S1P61966 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
AP1S1P61966 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP1S1P61966 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
AP1S1P61966 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP1S1P61966 MPV17-206ENST00000402722 827 ntTSL 3 BASIC15.23■□□□□ 0.03
AP1S1P61966 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC15.23■□□□□ 0.03
AP1S1P61966 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP1S1P61966 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.23■□□□□ 0.03
AP1S1P61966 ATP5G2P4-201ENST00000442175 420 ntBASIC15.23■□□□□ 0.03
AP1S1P61966 AC022210.1-201ENST00000449856 793 ntBASIC15.23■□□□□ 0.03
AP1S1P61966 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP1S1P61966 MESTP3-201ENST00000503460 968 ntBASIC15.23■□□□□ 0.03
AP1S1P61966 CFL1-212ENST00000531413 636 ntTSL 3 BASIC15.23■□□□□ 0.03
AP1S1P61966 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC15.23■□□□□ 0.03
AP1S1P61966 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
AP1S1P61966 PUDP-206ENST00000540122 825 ntTSL 2 BASIC15.23■□□□□ 0.03
AP1S1P61966 SNX29P1-201ENST00000548357 1007 ntBASIC15.23■□□□□ 0.03
AP1S1P61966 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
AP1S1P61966 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC15.23■□□□□ 0.03
AP1S1P61966 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.23■□□□□ 0.03
AP1S1P61966 AC004466.1-201ENST00000599515 1080 ntBASIC15.23■□□□□ 0.03
AP1S1P61966 AC138466.3-201ENST00000619983 221 ntBASIC15.23■□□□□ 0.03
AP1S1P61966 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.23■□□□□ 0.03
AP1S1P61966 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.23■□□□□ 0.03
AP1S1P61966 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.23■□□□□ 0.03
AP1S1P61966 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.23■□□□□ 0.03
AP1S1P61966 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP1S1P61966 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP1S1P61966 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
AP1S1P61966 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP1S1P61966 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP1S1P61966 AC144831.1-201ENST00000573312 2656 ntBASIC15.23■□□□□ 0.03
AP1S1P61966 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP1S1P61966 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP1S1P61966 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.23■□□□□ 0.03
AP1S1P61966 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
AP1S1P61966 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
AP1S1P61966 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.23■□□□□ 0.03
AP1S1P61966 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP1S1P61966 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP1S1P61966 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP1S1P61966 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP1S1P61966 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.23■□□□□ 0.03
AP1S1P61966 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.23■□□□□ 0.03
AP1S1P61966 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP1S1P61966 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP1S1P61966 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP1S1P61966 LINC00528-201ENST00000600723 2160 ntBASIC15.22■□□□□ 0.03
AP1S1P61966 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
AP1S1P61966 CLUHP2-201ENST00000426660 1303 ntBASIC15.22■□□□□ 0.03
AP1S1P61966 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
AP1S1P61966 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
AP1S1P61966 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP1S1P61966 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.22■□□□□ 0.03
AP1S1P61966 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP1S1P61966 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP1S1P61966 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP1S1P61966 ANKRD19P-201ENST00000338192 862 ntBASIC15.22■□□□□ 0.03
AP1S1P61966 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP1S1P61966 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.22■□□□□ 0.03
AP1S1P61966 TLE1P1-201ENST00000422965 589 ntBASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms