Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SEC61A1P61619 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SEC61A1P61619 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.39□□□□□ -0.27
SEC61A1P61619 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.39□□□□□ -0.27
SEC61A1P61619 TERF1P3-201ENST00000505638 1227 ntBASIC13.39□□□□□ -0.27
SEC61A1P61619 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.39□□□□□ -0.27
SEC61A1P61619 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.39□□□□□ -0.27
SEC61A1P61619 RAB34-223ENST00000636154 730 ntTSL 2 BASIC13.39□□□□□ -0.27
SEC61A1P61619 KRT8P44-201ENST00000441609 1350 ntBASIC13.39□□□□□ -0.27
SEC61A1P61619 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.39□□□□□ -0.27
SEC61A1P61619 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.39□□□□□ -0.27
SEC61A1P61619 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SEC61A1P61619 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SEC61A1P61619 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SEC61A1P61619 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC13.39□□□□□ -0.27
SEC61A1P61619 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.39□□□□□ -0.27
SEC61A1P61619 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.39□□□□□ -0.27
SEC61A1P61619 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SEC61A1P61619 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.39□□□□□ -0.27
SEC61A1P61619 CICP17-201ENST00000418553 2377 ntBASIC13.39□□□□□ -0.27
SEC61A1P61619 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.39□□□□□ -0.27
SEC61A1P61619 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SEC61A1P61619 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.39□□□□□ -0.27
SEC61A1P61619 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SEC61A1P61619 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
SEC61A1P61619 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SEC61A1P61619 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.39□□□□□ -0.27
SEC61A1P61619 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.39□□□□□ -0.27
SEC61A1P61619 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.39□□□□□ -0.27
SEC61A1P61619 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SEC61A1P61619 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.39□□□□□ -0.27
SEC61A1P61619 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.39□□□□□ -0.27
SEC61A1P61619 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SEC61A1P61619 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SEC61A1P61619 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SEC61A1P61619 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SEC61A1P61619 AC027601.5-201ENST00000624065 2482 ntBASIC13.38□□□□□ -0.27
SEC61A1P61619 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.38□□□□□ -0.27
SEC61A1P61619 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SEC61A1P61619 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SEC61A1P61619 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SEC61A1P61619 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SEC61A1P61619 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SEC61A1P61619 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
SEC61A1P61619 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SEC61A1P61619 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SEC61A1P61619 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SEC61A1P61619 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.38□□□□□ -0.27
SEC61A1P61619 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SEC61A1P61619 CYP4F24P-201ENST00000586049 1580 ntBASIC13.38□□□□□ -0.27
SEC61A1P61619 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SEC61A1P61619 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SEC61A1P61619 AL928921.2-201ENST00000641325 2442 ntBASIC13.38□□□□□ -0.27
SEC61A1P61619 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SEC61A1P61619 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
SEC61A1P61619 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.38□□□□□ -0.27
SEC61A1P61619 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
SEC61A1P61619 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SEC61A1P61619 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SEC61A1P61619 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SEC61A1P61619 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
SEC61A1P61619 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC13.38□□□□□ -0.27
SEC61A1P61619 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.38□□□□□ -0.27
SEC61A1P61619 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.38□□□□□ -0.27
SEC61A1P61619 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SEC61A1P61619 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SEC61A1P61619 RN7SL618P-201ENST00000477850 296 ntBASIC13.38□□□□□ -0.27
SEC61A1P61619 AC010336.2-201ENST00000564226 506 ntBASIC13.38□□□□□ -0.27
SEC61A1P61619 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
SEC61A1P61619 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.38□□□□□ -0.27
SEC61A1P61619 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
SEC61A1P61619 AC004840.1-201ENST00000636359 365 ntBASIC13.38□□□□□ -0.27
SEC61A1P61619 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SEC61A1P61619 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.38□□□□□ -0.27
SEC61A1P61619 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SEC61A1P61619 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SEC61A1P61619 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SEC61A1P61619 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.38□□□□□ -0.27
SEC61A1P61619 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.38□□□□□ -0.27
SEC61A1P61619 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SEC61A1P61619 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SEC61A1P61619 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SEC61A1P61619 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.38□□□□□ -0.27
SEC61A1P61619 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SEC61A1P61619 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC13.38□□□□□ -0.27
SEC61A1P61619 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SEC61A1P61619 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SEC61A1P61619 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SEC61A1P61619 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SEC61A1P61619 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SEC61A1P61619 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SEC61A1P61619 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.38□□□□□ -0.27
SEC61A1P61619 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
SEC61A1P61619 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
SEC61A1P61619 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SEC61A1P61619 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SEC61A1P61619 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SEC61A1P61619 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.38□□□□□ -0.27
SEC61A1P61619 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
SEC61A1P61619 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms