Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.94□□□□□ -0.18
CDC42P60953 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CDC42P60953 SLED1-202ENST00000512051 380 ntBASIC13.94□□□□□ -0.18
CDC42P60953 RNA5SP419-201ENST00000515908 135 ntBASIC13.94□□□□□ -0.18
CDC42P60953 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC13.94□□□□□ -0.18
CDC42P60953 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDC42P60953 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDC42P60953 RARRES2P9-201ENST00000565168 469 ntBASIC13.94□□□□□ -0.18
CDC42P60953 SLC25A6P4-201ENST00000586535 553 ntBASIC13.94□□□□□ -0.18
CDC42P60953 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.94□□□□□ -0.18
CDC42P60953 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC13.94□□□□□ -0.18
CDC42P60953 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CDC42P60953 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.94□□□□□ -0.18
CDC42P60953 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
CDC42P60953 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDC42P60953 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.94□□□□□ -0.18
CDC42P60953 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.94□□□□□ -0.18
CDC42P60953 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.94□□□□□ -0.18
CDC42P60953 AC079781.5-202ENST00000641784 3743 ntBASIC13.94□□□□□ -0.18
CDC42P60953 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDC42P60953 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.94□□□□□ -0.18
CDC42P60953 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CDC42P60953 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.94□□□□□ -0.18
CDC42P60953 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDC42P60953 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.94□□□□□ -0.18
CDC42P60953 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CDC42P60953 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CDC42P60953 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CDC42P60953 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CDC42P60953 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDC42P60953 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDC42P60953 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDC42P60953 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.93□□□□□ -0.18
CDC42P60953 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDC42P60953 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDC42P60953 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDC42P60953 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CDC42P60953 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDC42P60953 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDC42P60953 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.93□□□□□ -0.18
CDC42P60953 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDC42P60953 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDC42P60953 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CDC42P60953 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
CDC42P60953 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDC42P60953 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDC42P60953 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDC42P60953 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDC42P60953 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDC42P60953 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDC42P60953 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.93□□□□□ -0.18
CDC42P60953 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CDC42P60953 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDC42P60953 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDC42P60953 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDC42P60953 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC13.93□□□□□ -0.18
CDC42P60953 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDC42P60953 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDC42P60953 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
CDC42P60953 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDC42P60953 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDC42P60953 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDC42P60953 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.93□□□□□ -0.18
CDC42P60953 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC13.93□□□□□ -0.18
CDC42P60953 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC13.93□□□□□ -0.18
CDC42P60953 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC13.93□□□□□ -0.18
CDC42P60953 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC13.93□□□□□ -0.18
CDC42P60953 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC13.93□□□□□ -0.18
CDC42P60953 LINC01225-203ENST00000563550 1244 ntBASIC13.93□□□□□ -0.18
CDC42P60953 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC13.93□□□□□ -0.18
CDC42P60953 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.93□□□□□ -0.18
CDC42P60953 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDC42P60953 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDC42P60953 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.93□□□□□ -0.18
CDC42P60953 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDC42P60953 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDC42P60953 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC13.93□□□□□ -0.18
CDC42P60953 UXT-AS1-201ENST00000590504 1525 ntBASIC13.93□□□□□ -0.18
CDC42P60953 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CDC42P60953 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDC42P60953 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDC42P60953 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.93□□□□□ -0.18
CDC42P60953 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDC42P60953 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDC42P60953 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDC42P60953 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDC42P60953 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDC42P60953 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
CDC42P60953 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.93□□□□□ -0.18
CDC42P60953 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDC42P60953 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDC42P60953 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDC42P60953 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDC42P60953 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC13.92□□□□□ -0.18
CDC42P60953 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDC42P60953 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CDC42P60953 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CDC42P60953 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CDC42P60953 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CDC42P60953 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms