Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
RIPK4P57078 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
RIPK4P57078 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC19.78■□□□□ 0.76
RIPK4P57078 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC19.78■□□□□ 0.76
RIPK4P57078 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RIPK4P57078 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RIPK4P57078 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC19.78■□□□□ 0.76
RIPK4P57078 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
RIPK4P57078 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RIPK4P57078 ANKRD30BP2-201ENST00000435744 1610 ntBASIC19.78■□□□□ 0.76
RIPK4P57078 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC19.78■□□□□ 0.76
RIPK4P57078 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RIPK4P57078 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RIPK4P57078 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC19.78■□□□□ 0.76
RIPK4P57078 AC007274.1-201ENST00000439805 662 ntBASIC19.78■□□□□ 0.76
RIPK4P57078 FTLP10-202ENST00000505798 471 ntBASIC19.78■□□□□ 0.76
RIPK4P57078 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC19.78■□□□□ 0.76
RIPK4P57078 RNA5SP412-201ENST00000516234 123 ntBASIC19.78■□□□□ 0.76
RIPK4P57078 AC106820.3-201ENST00000561653 397 ntBASIC19.78■□□□□ 0.76
RIPK4P57078 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC19.78■□□□□ 0.76
RIPK4P57078 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC19.78■□□□□ 0.76
RIPK4P57078 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC19.78■□□□□ 0.76
RIPK4P57078 OR10B1P-201ENST00000601666 907 ntBASIC19.78■□□□□ 0.76
RIPK4P57078 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC19.78■□□□□ 0.76
RIPK4P57078 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC19.78■□□□□ 0.76
RIPK4P57078 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RIPK4P57078 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC19.78■□□□□ 0.76
RIPK4P57078 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RIPK4P57078 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RIPK4P57078 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
RIPK4P57078 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RIPK4P57078 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RIPK4P57078 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC19.77■□□□□ 0.76
RIPK4P57078 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
RIPK4P57078 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
RIPK4P57078 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RIPK4P57078 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
RIPK4P57078 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RIPK4P57078 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC19.77■□□□□ 0.76
RIPK4P57078 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC19.77■□□□□ 0.76
RIPK4P57078 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RIPK4P57078 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RIPK4P57078 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RIPK4P57078 AJ011931.1-201ENST00000618749 2492 ntBASIC19.77■□□□□ 0.76
RIPK4P57078 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RIPK4P57078 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
RIPK4P57078 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RIPK4P57078 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RIPK4P57078 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC19.77■□□□□ 0.76
RIPK4P57078 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC19.77■□□□□ 0.76
RIPK4P57078 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC19.77■□□□□ 0.76
RIPK4P57078 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC19.77■□□□□ 0.76
RIPK4P57078 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
RIPK4P57078 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC19.77■□□□□ 0.76
RIPK4P57078 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
RIPK4P57078 C2orf69P2-201ENST00000562032 1123 ntBASIC19.77■□□□□ 0.76
RIPK4P57078 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC19.77■□□□□ 0.76
RIPK4P57078 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
RIPK4P57078 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC19.77■□□□□ 0.76
RIPK4P57078 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RIPK4P57078 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
RIPK4P57078 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
RIPK4P57078 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RIPK4P57078 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
RIPK4P57078 POR-201ENST00000394893 2532 ntTSL 5 BASIC19.77■□□□□ 0.76
RIPK4P57078 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC19.77■□□□□ 0.76
RIPK4P57078 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RIPK4P57078 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
RIPK4P57078 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RIPK4P57078 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
RIPK4P57078 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC19.77■□□□□ 0.75
RIPK4P57078 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RIPK4P57078 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RIPK4P57078 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RIPK4P57078 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
RIPK4P57078 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
RIPK4P57078 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
RIPK4P57078 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC19.77■□□□□ 0.75
RIPK4P57078 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
RIPK4P57078 FKBP4P6-201ENST00000457486 1332 ntBASIC19.76■□□□□ 0.75
RIPK4P57078 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC19.76■□□□□ 0.75
RIPK4P57078 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RIPK4P57078 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC19.76■□□□□ 0.75
RIPK4P57078 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC19.76■□□□□ 0.75
RIPK4P57078 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC19.76■□□□□ 0.75
RIPK4P57078 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
RIPK4P57078 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RIPK4P57078 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
RIPK4P57078 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RIPK4P57078 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
RIPK4P57078 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC19.76■□□□□ 0.75
RIPK4P57078 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
RIPK4P57078 DUX4L45-201ENST00000566406 1057 ntBASIC19.76■□□□□ 0.75
RIPK4P57078 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC19.76■□□□□ 0.75
RIPK4P57078 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC19.76■□□□□ 0.75
RIPK4P57078 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC19.76■□□□□ 0.75
RIPK4P57078 AL033527.4-201ENST00000641026 673 ntBASIC19.76■□□□□ 0.75
RIPK4P57078 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RIPK4P57078 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RIPK4P57078 SF1-209ENST00000433274 2317 ntTSL 2 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms