Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CENPAP49450 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CENPAP49450 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CENPAP49450 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
CENPAP49450 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CENPAP49450 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CENPAP49450 CICP24-201ENST00000605464 2705 ntBASIC13.88□□□□□ -0.19
CENPAP49450 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CENPAP49450 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CENPAP49450 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
CENPAP49450 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.88□□□□□ -0.19
CENPAP49450 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CENPAP49450 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CENPAP49450 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CENPAP49450 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CENPAP49450 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CENPAP49450 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CENPAP49450 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.87□□□□□ -0.19
CENPAP49450 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CENPAP49450 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CENPAP49450 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CENPAP49450 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CENPAP49450 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CENPAP49450 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CENPAP49450 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CENPAP49450 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CENPAP49450 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CENPAP49450 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CENPAP49450 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.87□□□□□ -0.19
CENPAP49450 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CENPAP49450 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CENPAP49450 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.87□□□□□ -0.19
CENPAP49450 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.87□□□□□ -0.19
CENPAP49450 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CENPAP49450 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CENPAP49450 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.87□□□□□ -0.19
CENPAP49450 KRT18P13-201ENST00000400056 1290 ntBASIC13.87□□□□□ -0.19
CENPAP49450 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.87□□□□□ -0.19
CENPAP49450 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CENPAP49450 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC13.87□□□□□ -0.19
CENPAP49450 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CENPAP49450 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CENPAP49450 VPS29-207ENST00000549970 818 ntTSL 3 BASIC13.87□□□□□ -0.19
CENPAP49450 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CENPAP49450 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC13.87□□□□□ -0.19
CENPAP49450 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC13.87□□□□□ -0.19
CENPAP49450 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CENPAP49450 LINC00528-201ENST00000600723 2160 ntBASIC13.87□□□□□ -0.19
CENPAP49450 AC118758.2-201ENST00000614242 2813 ntBASIC13.87□□□□□ -0.19
CENPAP49450 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CENPAP49450 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CENPAP49450 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
CENPAP49450 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CENPAP49450 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
CENPAP49450 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.87□□□□□ -0.19
CENPAP49450 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
CENPAP49450 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CENPAP49450 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CENPAP49450 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CENPAP49450 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CENPAP49450 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CENPAP49450 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.87□□□□□ -0.19
CENPAP49450 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CENPAP49450 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CENPAP49450 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
CENPAP49450 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
CENPAP49450 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.86□□□□□ -0.19
CENPAP49450 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CENPAP49450 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
CENPAP49450 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CENPAP49450 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CENPAP49450 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CENPAP49450 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.86□□□□□ -0.19
CENPAP49450 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CENPAP49450 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.86□□□□□ -0.19
CENPAP49450 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CENPAP49450 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CENPAP49450 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CENPAP49450 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CENPAP49450 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CENPAP49450 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CENPAP49450 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CENPAP49450 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CENPAP49450 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CENPAP49450 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
CENPAP49450 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CENPAP49450 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.86□□□□□ -0.19
CENPAP49450 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CENPAP49450 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CENPAP49450 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CENPAP49450 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.86□□□□□ -0.19
CENPAP49450 PPP6R2P1-201ENST00000450880 1275 ntBASIC13.86□□□□□ -0.19
CENPAP49450 SLED1-202ENST00000512051 380 ntBASIC13.86□□□□□ -0.19
CENPAP49450 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.86□□□□□ -0.19
CENPAP49450 AC069262.1-201ENST00000539058 672 ntBASIC13.86□□□□□ -0.19
CENPAP49450 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.86□□□□□ -0.19
CENPAP49450 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC13.86□□□□□ -0.19
CENPAP49450 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC13.86□□□□□ -0.19
CENPAP49450 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CENPAP49450 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms