Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14□□□□□ -0.17
SLC1A3P43003 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14□□□□□ -0.17
SLC1A3P43003 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14□□□□□ -0.17
SLC1A3P43003 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SLC1A3P43003 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14□□□□□ -0.17
SLC1A3P43003 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SLC1A3P43003 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SLC1A3P43003 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14□□□□□ -0.17
SLC1A3P43003 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14□□□□□ -0.17
SLC1A3P43003 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14□□□□□ -0.17
SLC1A3P43003 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SLC1A3P43003 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14□□□□□ -0.17
SLC1A3P43003 GNAQP1-201ENST00000444815 1067 ntBASIC14□□□□□ -0.17
SLC1A3P43003 SPTLC1P1-201ENST00000447199 261 ntBASIC14□□□□□ -0.17
SLC1A3P43003 UGT1A2P-201ENST00000454886 866 ntBASIC14□□□□□ -0.17
SLC1A3P43003 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14□□□□□ -0.17
SLC1A3P43003 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14□□□□□ -0.17
SLC1A3P43003 AC004066.1-201ENST00000502488 802 ntBASIC14□□□□□ -0.17
SLC1A3P43003 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14□□□□□ -0.17
SLC1A3P43003 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14□□□□□ -0.17
SLC1A3P43003 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14□□□□□ -0.17
SLC1A3P43003 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14□□□□□ -0.17
SLC1A3P43003 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14□□□□□ -0.17
SLC1A3P43003 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14□□□□□ -0.17
SLC1A3P43003 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14□□□□□ -0.17
SLC1A3P43003 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14□□□□□ -0.17
SLC1A3P43003 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SLC1A3P43003 AC099568.2-201ENST00000609194 695 ntBASIC14□□□□□ -0.17
SLC1A3P43003 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14□□□□□ -0.17
SLC1A3P43003 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14□□□□□ -0.17
SLC1A3P43003 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14□□□□□ -0.17
SLC1A3P43003 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
SLC1A3P43003 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14□□□□□ -0.17
SLC1A3P43003 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SLC1A3P43003 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14□□□□□ -0.17
SLC1A3P43003 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14□□□□□ -0.17
SLC1A3P43003 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SLC1A3P43003 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SLC1A3P43003 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14□□□□□ -0.17
SLC1A3P43003 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14□□□□□ -0.17
SLC1A3P43003 PCDHGB8P-201ENST00000502926 1973 ntBASIC14□□□□□ -0.17
SLC1A3P43003 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
SLC1A3P43003 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC1A3P43003 AL122018.1-201ENST00000446607 2310 ntBASIC13.99□□□□□ -0.17
SLC1A3P43003 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC1A3P43003 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.99□□□□□ -0.17
SLC1A3P43003 DRD5P1-201ENST00000456605 1438 ntBASIC13.99□□□□□ -0.17
SLC1A3P43003 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC1A3P43003 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC1A3P43003 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC1A3P43003 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC1A3P43003 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC1A3P43003 SLC7A15P-201ENST00000424028 1363 ntBASIC13.99□□□□□ -0.17
SLC1A3P43003 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
SLC1A3P43003 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC1A3P43003 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
SLC1A3P43003 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC1A3P43003 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC1A3P43003 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC1A3P43003 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
SLC1A3P43003 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SLC1A3P43003 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC1A3P43003 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.99□□□□□ -0.17
SLC1A3P43003 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC1A3P43003 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC1A3P43003 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SLC1A3P43003 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC1A3P43003 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.99□□□□□ -0.17
SLC1A3P43003 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC1A3P43003 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC13.99□□□□□ -0.17
SLC1A3P43003 AC026410.3-201ENST00000514280 936 ntBASIC13.99□□□□□ -0.17
SLC1A3P43003 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.99□□□□□ -0.17
SLC1A3P43003 AC055876.2-201ENST00000531834 546 ntBASIC13.99□□□□□ -0.17
SLC1A3P43003 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.99□□□□□ -0.17
SLC1A3P43003 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC1A3P43003 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC1A3P43003 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
SLC1A3P43003 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.99□□□□□ -0.17
SLC1A3P43003 AL049840.4-201ENST00000602422 811 ntBASIC13.99□□□□□ -0.17
SLC1A3P43003 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.99□□□□□ -0.17
SLC1A3P43003 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.99□□□□□ -0.17
SLC1A3P43003 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC1A3P43003 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC1A3P43003 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC1A3P43003 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC1A3P43003 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC1A3P43003 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
SLC1A3P43003 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.99□□□□□ -0.17
SLC1A3P43003 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.99□□□□□ -0.17
SLC1A3P43003 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC1A3P43003 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC1A3P43003 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
SLC1A3P43003 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC1A3P43003 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC1A3P43003 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SLC1A3P43003 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC1A3P43003 REXO1L2P-201ENST00000425429 2069 ntBASIC13.99□□□□□ -0.17
SLC1A3P43003 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC1A3P43003 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLC1A3P43003 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms