Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC13.3□□□□□ -0.28
GDNFP39905 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.3□□□□□ -0.28
GDNFP39905 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GDNFP39905 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC13.3□□□□□ -0.28
GDNFP39905 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
GDNFP39905 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC13.3□□□□□ -0.28
GDNFP39905 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GDNFP39905 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC13.3□□□□□ -0.28
GDNFP39905 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC13.3□□□□□ -0.28
GDNFP39905 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC13.3□□□□□ -0.28
GDNFP39905 AC023511.2-201ENST00000618803 211 ntBASIC13.3□□□□□ -0.28
GDNFP39905 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
GDNFP39905 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC13.3□□□□□ -0.28
GDNFP39905 AC134684.3-201ENST00000641758 218 ntBASIC13.3□□□□□ -0.28
GDNFP39905 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
GDNFP39905 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GDNFP39905 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.3□□□□□ -0.28
GDNFP39905 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
GDNFP39905 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.3□□□□□ -0.28
GDNFP39905 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
GDNFP39905 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
GDNFP39905 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
GDNFP39905 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
GDNFP39905 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.3□□□□□ -0.28
GDNFP39905 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
GDNFP39905 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
GDNFP39905 AC018442.1-201ENST00000421439 2061 ntBASIC13.3□□□□□ -0.28
GDNFP39905 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
GDNFP39905 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.3□□□□□ -0.28
GDNFP39905 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
GDNFP39905 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.3□□□□□ -0.28
GDNFP39905 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC13.3□□□□□ -0.28
GDNFP39905 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.3□□□□□ -0.28
GDNFP39905 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
GDNFP39905 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.3□□□□□ -0.28
GDNFP39905 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.3□□□□□ -0.28
GDNFP39905 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
GDNFP39905 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
GDNFP39905 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.29□□□□□ -0.28
GDNFP39905 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
GDNFP39905 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
GDNFP39905 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
GDNFP39905 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.29□□□□□ -0.28
GDNFP39905 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GDNFP39905 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GDNFP39905 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
GDNFP39905 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
GDNFP39905 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.29□□□□□ -0.28
GDNFP39905 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
GDNFP39905 DGCR9-201ENST00000609630 2415 ntBASIC13.29□□□□□ -0.28
GDNFP39905 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GDNFP39905 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GDNFP39905 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GDNFP39905 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GDNFP39905 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC13.29□□□□□ -0.28
GDNFP39905 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
GDNFP39905 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GDNFP39905 KRT18P32-201ENST00000424695 1287 ntBASIC13.29□□□□□ -0.28
GDNFP39905 GPS2P2-201ENST00000430745 888 ntBASIC13.29□□□□□ -0.28
GDNFP39905 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
GDNFP39905 PHKG1P2-201ENST00000457537 863 ntBASIC13.29□□□□□ -0.28
GDNFP39905 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC13.29□□□□□ -0.28
GDNFP39905 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.29□□□□□ -0.28
GDNFP39905 AP000344.2-201ENST00000512987 629 ntBASIC13.29□□□□□ -0.28
GDNFP39905 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13.29□□□□□ -0.28
GDNFP39905 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC13.29□□□□□ -0.28
GDNFP39905 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC13.29□□□□□ -0.28
GDNFP39905 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC13.29□□□□□ -0.28
GDNFP39905 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC13.29□□□□□ -0.28
GDNFP39905 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GDNFP39905 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
GDNFP39905 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
GDNFP39905 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
GDNFP39905 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.29□□□□□ -0.28
GDNFP39905 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GDNFP39905 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.29□□□□□ -0.28
GDNFP39905 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.29□□□□□ -0.28
GDNFP39905 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
GDNFP39905 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
GDNFP39905 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.29□□□□□ -0.28
GDNFP39905 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
GDNFP39905 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
GDNFP39905 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
GDNFP39905 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
GDNFP39905 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
GDNFP39905 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GDNFP39905 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GDNFP39905 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
GDNFP39905 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GDNFP39905 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
GDNFP39905 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
GDNFP39905 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
GDNFP39905 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
GDNFP39905 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
GDNFP39905 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.29□□□□□ -0.28
GDNFP39905 AC084364.1-201ENST00000551967 1556 ntBASIC13.28□□□□□ -0.28
GDNFP39905 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.28□□□□□ -0.28
GDNFP39905 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GDNFP39905 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
GDNFP39905 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms