Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.71■□□□□ 0.11
SCNN1AP37088 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.71■□□□□ 0.11
SCNN1AP37088 AL162274.1-201ENST00000617191 1098 ntBASIC15.71■□□□□ 0.11
SCNN1AP37088 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.71■□□□□ 0.11
SCNN1AP37088 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SCNN1AP37088 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SCNN1AP37088 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SCNN1AP37088 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SCNN1AP37088 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SCNN1AP37088 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SCNN1AP37088 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SCNN1AP37088 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
SCNN1AP37088 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
SCNN1AP37088 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SCNN1AP37088 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SCNN1AP37088 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.7■□□□□ 0.1
SCNN1AP37088 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SCNN1AP37088 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SCNN1AP37088 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SCNN1AP37088 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.7■□□□□ 0.1
SCNN1AP37088 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.7■□□□□ 0.1
SCNN1AP37088 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SCNN1AP37088 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SCNN1AP37088 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.7■□□□□ 0.1
SCNN1AP37088 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SCNN1AP37088 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.7■□□□□ 0.1
SCNN1AP37088 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SCNN1AP37088 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SCNN1AP37088 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SCNN1AP37088 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.7■□□□□ 0.1
SCNN1AP37088 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SCNN1AP37088 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SCNN1AP37088 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SCNN1AP37088 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SCNN1AP37088 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SCNN1AP37088 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.7■□□□□ 0.1
SCNN1AP37088 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
SCNN1AP37088 AC007551.1-201ENST00000457394 519 ntBASIC15.7■□□□□ 0.1
SCNN1AP37088 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.7■□□□□ 0.1
SCNN1AP37088 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
SCNN1AP37088 GCOM2-201ENST00000509133 1104 ntBASIC15.7■□□□□ 0.1
SCNN1AP37088 AP000812.2-201ENST00000538934 718 ntBASIC15.7■□□□□ 0.1
SCNN1AP37088 LINC01551-203ENST00000550266 455 ntTSL 3 BASIC15.7■□□□□ 0.1
SCNN1AP37088 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC15.7■□□□□ 0.1
SCNN1AP37088 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.7■□□□□ 0.1
SCNN1AP37088 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.7■□□□□ 0.1
SCNN1AP37088 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.7■□□□□ 0.1
SCNN1AP37088 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.7■□□□□ 0.1
SCNN1AP37088 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.7■□□□□ 0.1
SCNN1AP37088 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.7■□□□□ 0.1
SCNN1AP37088 AC006453.4-201ENST00000636949 1252 ntBASIC15.7■□□□□ 0.1
SCNN1AP37088 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SCNN1AP37088 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.7■□□□□ 0.1
SCNN1AP37088 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SCNN1AP37088 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.7■□□□□ 0.1
SCNN1AP37088 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SCNN1AP37088 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
SCNN1AP37088 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SCNN1AP37088 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SCNN1AP37088 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.7■□□□□ 0.1
SCNN1AP37088 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.7■□□□□ 0.1
SCNN1AP37088 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
SCNN1AP37088 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SCNN1AP37088 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SCNN1AP37088 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SCNN1AP37088 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.7■□□□□ 0.1
SCNN1AP37088 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.69■□□□□ 0.1
SCNN1AP37088 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SCNN1AP37088 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SCNN1AP37088 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SCNN1AP37088 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SCNN1AP37088 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SCNN1AP37088 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SCNN1AP37088 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.69■□□□□ 0.1
SCNN1AP37088 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SCNN1AP37088 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SCNN1AP37088 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
SCNN1AP37088 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
SCNN1AP37088 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SCNN1AP37088 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SCNN1AP37088 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SCNN1AP37088 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.69■□□□□ 0.1
SCNN1AP37088 AC006001.1-201ENST00000325130 474 ntBASIC15.69■□□□□ 0.1
SCNN1AP37088 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SCNN1AP37088 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SCNN1AP37088 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC15.69■□□□□ 0.1
SCNN1AP37088 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SCNN1AP37088 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SCNN1AP37088 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SCNN1AP37088 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SCNN1AP37088 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.69■□□□□ 0.1
SCNN1AP37088 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.69■□□□□ 0.1
SCNN1AP37088 AC106820.3-201ENST00000561653 397 ntBASIC15.69■□□□□ 0.1
SCNN1AP37088 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.69■□□□□ 0.1
SCNN1AP37088 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
SCNN1AP37088 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SCNN1AP37088 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SCNN1AP37088 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.69■□□□□ 0.1
SCNN1AP37088 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SCNN1AP37088 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms