Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.03■□□□□ 0.16
RFC1P35251 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC16.03■□□□□ 0.16
RFC1P35251 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RFC1P35251 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RFC1P35251 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFC1P35251 USP35-204ENST00000530267 2419 ntTSL 2 BASIC16.03■□□□□ 0.16
RFC1P35251 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC16.03■□□□□ 0.16
RFC1P35251 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.03■□□□□ 0.16
RFC1P35251 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.03■□□□□ 0.16
RFC1P35251 AC007686.3-201ENST00000619017 3487 ntBASIC16.03■□□□□ 0.16
RFC1P35251 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFC1P35251 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RFC1P35251 C1QBPP1-201ENST00000400117 770 ntBASIC16.03■□□□□ 0.16
RFC1P35251 HMGN1P19-201ENST00000436976 333 ntBASIC16.03■□□□□ 0.16
RFC1P35251 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.03■□□□□ 0.16
RFC1P35251 SPDYE22P-201ENST00000582158 798 ntBASIC16.03■□□□□ 0.16
RFC1P35251 CTBP2P3-201ENST00000585629 1255 ntBASIC16.03■□□□□ 0.16
RFC1P35251 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
RFC1P35251 AC008494.3-201ENST00000606615 944 ntBASIC16.03■□□□□ 0.16
RFC1P35251 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.03■□□□□ 0.16
RFC1P35251 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFC1P35251 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RFC1P35251 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFC1P35251 KCP-203ENST00000610776 5108 ntTSL 5 BASIC16.03■□□□□ 0.16
RFC1P35251 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RFC1P35251 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFC1P35251 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
RFC1P35251 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.03■□□□□ 0.16
RFC1P35251 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFC1P35251 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC16.03■□□□□ 0.16
RFC1P35251 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
RFC1P35251 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFC1P35251 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RFC1P35251 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFC1P35251 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
RFC1P35251 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
RFC1P35251 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
RFC1P35251 KRT8P22-201ENST00000562317 1415 ntBASIC16.02■□□□□ 0.16
RFC1P35251 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RFC1P35251 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RFC1P35251 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RFC1P35251 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RFC1P35251 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RFC1P35251 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
RFC1P35251 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.02■□□□□ 0.16
RFC1P35251 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC16.02■□□□□ 0.16
RFC1P35251 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RFC1P35251 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC16.02■□□□□ 0.16
RFC1P35251 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RFC1P35251 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.16
RFC1P35251 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RFC1P35251 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RFC1P35251 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RFC1P35251 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RFC1P35251 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RFC1P35251 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.02■□□□□ 0.16
RFC1P35251 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
RFC1P35251 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.02■□□□□ 0.16
RFC1P35251 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.02■□□□□ 0.16
RFC1P35251 PIN1P1-201ENST00000412108 996 ntBASIC16.02■□□□□ 0.16
RFC1P35251 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.02■□□□□ 0.16
RFC1P35251 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.02■□□□□ 0.16
RFC1P35251 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.02■□□□□ 0.16
RFC1P35251 ELK1P1-201ENST00000485699 580 ntBASIC16.02■□□□□ 0.16
RFC1P35251 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.02■□□□□ 0.16
RFC1P35251 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.02■□□□□ 0.16
RFC1P35251 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RFC1P35251 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.02■□□□□ 0.16
RFC1P35251 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.02■□□□□ 0.16
RFC1P35251 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.02■□□□□ 0.16
RFC1P35251 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.02■□□□□ 0.16
RFC1P35251 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
RFC1P35251 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
RFC1P35251 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
RFC1P35251 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.02■□□□□ 0.15
RFC1P35251 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RFC1P35251 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RFC1P35251 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.02■□□□□ 0.15
RFC1P35251 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.02■□□□□ 0.15
RFC1P35251 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RFC1P35251 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
RFC1P35251 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RFC1P35251 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RFC1P35251 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
RFC1P35251 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
RFC1P35251 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.02■□□□□ 0.15
RFC1P35251 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC16.02■□□□□ 0.15
RFC1P35251 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RFC1P35251 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
RFC1P35251 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RFC1P35251 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
RFC1P35251 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
RFC1P35251 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.01■□□□□ 0.15
RFC1P35251 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC16.01■□□□□ 0.15
RFC1P35251 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
RFC1P35251 SF1-209ENST00000433274 2317 ntTSL 2 BASIC16.01■□□□□ 0.15
RFC1P35251 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC16.01■□□□□ 0.15
RFC1P35251 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.01■□□□□ 0.15
RFC1P35251 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.01■□□□□ 0.15
RFC1P35251 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms