Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC6A4P31645 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.51■□□□□ 0.07
SLC6A4P31645 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC6A4P31645 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SLC6A4P31645 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC6A4P31645 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
SLC6A4P31645 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SLC6A4P31645 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC6A4P31645 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SLC6A4P31645 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC6A4P31645 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC6A4P31645 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SLC6A4P31645 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC6A4P31645 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC6A4P31645 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SLC6A4P31645 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.5■□□□□ 0.07
SLC6A4P31645 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SLC6A4P31645 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC6A4P31645 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC6A4P31645 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.5■□□□□ 0.07
SLC6A4P31645 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC6A4P31645 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
SLC6A4P31645 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC6A4P31645 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC6A4P31645 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC6A4P31645 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.5■□□□□ 0.07
SLC6A4P31645 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.5■□□□□ 0.07
SLC6A4P31645 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.5■□□□□ 0.07
SLC6A4P31645 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
SLC6A4P31645 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC6A4P31645 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC6A4P31645 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC6A4P31645 RN7SKP230-201ENST00000365642 335 ntBASIC15.5■□□□□ 0.07
SLC6A4P31645 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SLC6A4P31645 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.5■□□□□ 0.07
SLC6A4P31645 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.5■□□□□ 0.07
SLC6A4P31645 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC6A4P31645 HOMER2P2-201ENST00000451621 847 ntBASIC15.5■□□□□ 0.07
SLC6A4P31645 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC15.5■□□□□ 0.07
SLC6A4P31645 FAM86HP-204ENST00000513466 959 ntBASIC15.5■□□□□ 0.07
SLC6A4P31645 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15.5■□□□□ 0.07
SLC6A4P31645 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC6A4P31645 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC15.5■□□□□ 0.07
SLC6A4P31645 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC6A4P31645 PPY2P-201ENST00000582808 702 ntBASIC15.5■□□□□ 0.07
SLC6A4P31645 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SLC6A4P31645 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SLC6A4P31645 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15.5■□□□□ 0.07
SLC6A4P31645 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC6A4P31645 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.5■□□□□ 0.07
SLC6A4P31645 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC15.5■□□□□ 0.07
SLC6A4P31645 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC6A4P31645 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.5■□□□□ 0.07
SLC6A4P31645 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.5■□□□□ 0.07
SLC6A4P31645 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SLC6A4P31645 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SLC6A4P31645 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.5■□□□□ 0.07
SLC6A4P31645 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
SLC6A4P31645 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC6A4P31645 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC6A4P31645 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC6A4P31645 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.5■□□□□ 0.07
SLC6A4P31645 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
SLC6A4P31645 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC6A4P31645 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
SLC6A4P31645 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC6A4P31645 AC020910.5-201ENST00000623668 1865 ntBASIC15.5■□□□□ 0.07
SLC6A4P31645 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC6A4P31645 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SLC6A4P31645 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
SLC6A4P31645 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.5■□□□□ 0.07
SLC6A4P31645 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC6A4P31645 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SLC6A4P31645 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
SLC6A4P31645 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.49■□□□□ 0.07
SLC6A4P31645 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.49■□□□□ 0.07
SLC6A4P31645 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.49■□□□□ 0.07
SLC6A4P31645 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SLC6A4P31645 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SLC6A4P31645 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
SLC6A4P31645 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SLC6A4P31645 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SLC6A4P31645 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SLC6A4P31645 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.49■□□□□ 0.07
SLC6A4P31645 AC011840.2-201ENST00000563063 1520 ntBASIC15.49■□□□□ 0.07
SLC6A4P31645 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SLC6A4P31645 AC063926.3-201ENST00000624734 5658 ntBASIC15.49■□□□□ 0.07
SLC6A4P31645 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.49■□□□□ 0.07
SLC6A4P31645 AC009093.2-202ENST00000620513 2079 ntBASIC15.49■□□□□ 0.07
SLC6A4P31645 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SLC6A4P31645 KRT8P4-201ENST00000509735 1454 ntBASIC15.49■□□□□ 0.07
SLC6A4P31645 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SLC6A4P31645 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC15.49■□□□□ 0.07
SLC6A4P31645 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.49■□□□□ 0.07
SLC6A4P31645 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.49■□□□□ 0.07
SLC6A4P31645 ACTBP11-201ENST00000436287 1126 ntBASIC15.49■□□□□ 0.07
SLC6A4P31645 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SLC6A4P31645 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.49■□□□□ 0.07
SLC6A4P31645 GOLGA2P4-201ENST00000441462 777 ntBASIC15.49■□□□□ 0.07
SLC6A4P31645 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms