Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATF3P18847 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATF3P18847 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
ATF3P18847 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ATF3P18847 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
ATF3P18847 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ATF3P18847 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ATF3P18847 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATF3P18847 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC20.41■□□□□ 0.86
ATF3P18847 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC20.41■□□□□ 0.86
ATF3P18847 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
ATF3P18847 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC20.41■□□□□ 0.86
ATF3P18847 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC20.41■□□□□ 0.86
ATF3P18847 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ATF3P18847 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC20.41■□□□□ 0.86
ATF3P18847 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
ATF3P18847 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
ATF3P18847 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
ATF3P18847 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
ATF3P18847 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
ATF3P18847 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATF3P18847 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ATF3P18847 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATF3P18847 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATF3P18847 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATF3P18847 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATF3P18847 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATF3P18847 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
ATF3P18847 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATF3P18847 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
ATF3P18847 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATF3P18847 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ATF3P18847 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC20.4■□□□□ 0.86
ATF3P18847 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATF3P18847 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC20.4■□□□□ 0.86
ATF3P18847 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
ATF3P18847 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC20.4■□□□□ 0.86
ATF3P18847 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC20.4■□□□□ 0.86
ATF3P18847 ACTBP7-201ENST00000418351 1124 ntBASIC20.4■□□□□ 0.86
ATF3P18847 SALL4P5-201ENST00000419001 1760 ntBASIC20.4■□□□□ 0.86
ATF3P18847 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATF3P18847 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC20.4■□□□□ 0.86
ATF3P18847 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC20.4■□□□□ 0.86
ATF3P18847 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATF3P18847 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC20.4■□□□□ 0.86
ATF3P18847 RN7SL530P-201ENST00000485097 298 ntBASIC20.4■□□□□ 0.86
ATF3P18847 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC20.4■□□□□ 0.86
ATF3P18847 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC20.4■□□□□ 0.86
ATF3P18847 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
ATF3P18847 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
ATF3P18847 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATF3P18847 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ATF3P18847 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
ATF3P18847 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ATF3P18847 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC20.39■□□□□ 0.86
ATF3P18847 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ATF3P18847 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ATF3P18847 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
ATF3P18847 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ATF3P18847 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
ATF3P18847 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
ATF3P18847 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
ATF3P18847 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC20.39■□□□□ 0.86
ATF3P18847 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
ATF3P18847 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
ATF3P18847 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC20.39■□□□□ 0.86
ATF3P18847 TMBIM7P-202ENST00000641474 1516 ntBASIC20.39■□□□□ 0.85
ATF3P18847 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATF3P18847 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATF3P18847 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATF3P18847 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC20.39■□□□□ 0.85
ATF3P18847 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATF3P18847 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ATF3P18847 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC20.39■□□□□ 0.85
ATF3P18847 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC20.39■□□□□ 0.85
ATF3P18847 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC20.39■□□□□ 0.85
ATF3P18847 AL512306.1-201ENST00000432698 848 ntBASIC20.39■□□□□ 0.85
ATF3P18847 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC20.39■□□□□ 0.85
ATF3P18847 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC20.39■□□□□ 0.85
ATF3P18847 PEBP1P2-201ENST00000603980 558 ntBASIC20.39■□□□□ 0.85
ATF3P18847 AL022334.2-201ENST00000610000 484 ntBASIC20.39■□□□□ 0.85
ATF3P18847 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATF3P18847 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC20.39■□□□□ 0.85
ATF3P18847 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATF3P18847 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATF3P18847 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ATF3P18847 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATF3P18847 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATF3P18847 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
ATF3P18847 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATF3P18847 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATF3P18847 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ATF3P18847 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ATF3P18847 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
ATF3P18847 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC20.38■□□□□ 0.85
ATF3P18847 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC20.38■□□□□ 0.85
ATF3P18847 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATF3P18847 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATF3P18847 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATF3P18847 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms