Protein–RNA interactions for Protein: P17655

CAPN2, Calpain-2 catalytic subunit, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2P17655 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CAPN2P17655 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CAPN2P17655 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.56■□□□□ 0.4
CAPN2P17655 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC17.56■□□□□ 0.4
CAPN2P17655 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CAPN2P17655 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CAPN2P17655 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CAPN2P17655 AC079178.1-201ENST00000420915 656 ntBASIC17.56■□□□□ 0.4
CAPN2P17655 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC17.56■□□□□ 0.4
CAPN2P17655 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CAPN2P17655 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC17.56■□□□□ 0.4
CAPN2P17655 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC17.56■□□□□ 0.4
CAPN2P17655 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC17.56■□□□□ 0.4
CAPN2P17655 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC17.56■□□□□ 0.4
CAPN2P17655 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC17.56■□□□□ 0.4
CAPN2P17655 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC17.56■□□□□ 0.4
CAPN2P17655 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC17.56■□□□□ 0.4
CAPN2P17655 MIR4741-201ENST00000579822 90 ntBASIC17.56■□□□□ 0.4
CAPN2P17655 AC100757.4-201ENST00000626934 759 ntBASIC17.56■□□□□ 0.4
CAPN2P17655 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CAPN2P17655 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CAPN2P17655 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.56■□□□□ 0.4
CAPN2P17655 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
CAPN2P17655 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CAPN2P17655 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CAPN2P17655 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CAPN2P17655 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CAPN2P17655 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CAPN2P17655 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CAPN2P17655 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CAPN2P17655 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CAPN2P17655 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC17.56■□□□□ 0.4
CAPN2P17655 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.56■□□□□ 0.4
CAPN2P17655 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CAPN2P17655 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
CAPN2P17655 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CAPN2P17655 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CAPN2P17655 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CAPN2P17655 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.55■□□□□ 0.4
CAPN2P17655 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CAPN2P17655 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC17.55■□□□□ 0.4
CAPN2P17655 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CAPN2P17655 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CAPN2P17655 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CAPN2P17655 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CAPN2P17655 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CAPN2P17655 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC17.55■□□□□ 0.4
CAPN2P17655 AC136604.1-201ENST00000418535 575 ntBASIC17.55■□□□□ 0.4
CAPN2P17655 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC17.55■□□□□ 0.4
CAPN2P17655 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC17.55■□□□□ 0.4
CAPN2P17655 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CAPN2P17655 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC17.55■□□□□ 0.4
CAPN2P17655 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC17.55■□□□□ 0.4
CAPN2P17655 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.55■□□□□ 0.4
CAPN2P17655 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC17.55■□□□□ 0.4
CAPN2P17655 HNRNPA1P48-202ENST00000565308 961 ntBASIC17.55■□□□□ 0.4
CAPN2P17655 RN7SL48P-201ENST00000579283 293 ntBASIC17.55■□□□□ 0.4
CAPN2P17655 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC17.55■□□□□ 0.4
CAPN2P17655 AL096828.3-201ENST00000615354 462 ntBASIC17.55■□□□□ 0.4
CAPN2P17655 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.55■□□□□ 0.4
CAPN2P17655 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
CAPN2P17655 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
CAPN2P17655 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CAPN2P17655 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CAPN2P17655 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CAPN2P17655 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC17.55■□□□□ 0.4
CAPN2P17655 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CAPN2P17655 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC17.55■□□□□ 0.4
CAPN2P17655 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CAPN2P17655 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CAPN2P17655 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CAPN2P17655 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CAPN2P17655 AL138709.1-201ENST00000614840 1693 ntBASIC17.55■□□□□ 0.4
CAPN2P17655 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CAPN2P17655 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN2P17655 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN2P17655 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN2P17655 REXO1L8P-201ENST00000604378 1897 ntBASIC17.54■□□□□ 0.4
CAPN2P17655 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN2P17655 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN2P17655 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CAPN2P17655 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
CAPN2P17655 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
CAPN2P17655 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN2P17655 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN2P17655 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.54■□□□□ 0.4
CAPN2P17655 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN2P17655 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN2P17655 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN2P17655 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN2P17655 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN2P17655 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.54■□□□□ 0.4
CAPN2P17655 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN2P17655 MIR33B-201ENST00000385104 96 ntBASIC17.54■□□□□ 0.4
CAPN2P17655 RPL17P11-201ENST00000417593 544 ntBASIC17.54■□□□□ 0.4
CAPN2P17655 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CAPN2P17655 AC244157.2-201ENST00000616239 1006 ntBASIC17.54■□□□□ 0.4
CAPN2P17655 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC17.54■□□□□ 0.4
CAPN2P17655 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.54■□□□□ 0.4
CAPN2P17655 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms