Protein–RNA interactions for Protein: P16615

ATP2A2, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, humanhuman

Known RBP Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2P16615 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC16.83■□□□□ 0.28
ATP2A2P16615 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
ATP2A2P16615 ECM1P1-201ENST00000604092 1279 ntBASIC16.83■□□□□ 0.28
ATP2A2P16615 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP2A2P16615 AC091812.3-201ENST00000621362 345 ntBASIC16.83■□□□□ 0.28
ATP2A2P16615 BX539320.1-201ENST00000623759 877 ntBASIC16.83■□□□□ 0.28
ATP2A2P16615 CU633904.3-201ENST00000624042 1029 ntBASIC16.83■□□□□ 0.28
ATP2A2P16615 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP2A2P16615 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.83■□□□□ 0.28
ATP2A2P16615 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.83■□□□□ 0.28
ATP2A2P16615 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP2A2P16615 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.82■□□□□ 0.28
ATP2A2P16615 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.82■□□□□ 0.28
ATP2A2P16615 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A2P16615 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
ATP2A2P16615 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A2P16615 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A2P16615 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A2P16615 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A2P16615 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ATP2A2P16615 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.82■□□□□ 0.28
ATP2A2P16615 AL138799.1-201ENST00000448213 1675 ntBASIC16.82■□□□□ 0.28
ATP2A2P16615 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A2P16615 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
ATP2A2P16615 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
ATP2A2P16615 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A2P16615 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC16.82■□□□□ 0.28
ATP2A2P16615 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A2P16615 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
ATP2A2P16615 AL133267.1-201ENST00000398220 340 ntBASIC16.82■□□□□ 0.28
ATP2A2P16615 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC16.82■□□□□ 0.28
ATP2A2P16615 DEF8-202ENST00000418391 852 ntTSL 2 BASIC16.82■□□□□ 0.28
ATP2A2P16615 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC16.82■□□□□ 0.28
ATP2A2P16615 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A2P16615 HSPB1P2-201ENST00000448722 546 ntBASIC16.82■□□□□ 0.28
ATP2A2P16615 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC16.82■□□□□ 0.28
ATP2A2P16615 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC16.82■□□□□ 0.28
ATP2A2P16615 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC16.82■□□□□ 0.28
ATP2A2P16615 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC16.82■□□□□ 0.28
ATP2A2P16615 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC16.82■□□□□ 0.28
ATP2A2P16615 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC16.82■□□□□ 0.28
ATP2A2P16615 SPCS2P2-201ENST00000603270 608 ntBASIC16.82■□□□□ 0.28
ATP2A2P16615 DIO1-215ENST00000610607 796 ntTSL 5 BASIC16.82■□□□□ 0.28
ATP2A2P16615 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A2P16615 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A2P16615 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A2P16615 PCDHA3-202ENST00000532566 4594 ntBASIC16.82■□□□□ 0.28
ATP2A2P16615 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A2P16615 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A2P16615 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A2P16615 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.82■□□□□ 0.28
ATP2A2P16615 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A2P16615 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A2P16615 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A2P16615 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP2A2P16615 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP2A2P16615 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
ATP2A2P16615 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ATP2A2P16615 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP2A2P16615 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP2A2P16615 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP2A2P16615 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
ATP2A2P16615 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP2A2P16615 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ATP2A2P16615 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP2A2P16615 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP2A2P16615 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP2A2P16615 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ATP2A2P16615 TPM3P8-201ENST00000330554 643 ntBASIC16.81■□□□□ 0.28
ATP2A2P16615 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP2A2P16615 MIR769-201ENST00000390225 118 ntBASIC16.81■□□□□ 0.28
ATP2A2P16615 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC16.81■□□□□ 0.28
ATP2A2P16615 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC16.81■□□□□ 0.28
ATP2A2P16615 CNN2P10-201ENST00000443067 918 ntBASIC16.81■□□□□ 0.28
ATP2A2P16615 AL133466.1-201ENST00000447582 150 ntBASIC16.81■□□□□ 0.28
ATP2A2P16615 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ATP2A2P16615 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC16.81■□□□□ 0.28
ATP2A2P16615 RN7SL720P-201ENST00000488178 304 ntBASIC16.81■□□□□ 0.28
ATP2A2P16615 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC16.81■□□□□ 0.28
ATP2A2P16615 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ATP2A2P16615 GAPDHP40-201ENST00000505218 1006 ntBASIC16.81■□□□□ 0.28
ATP2A2P16615 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ATP2A2P16615 FADS2-212ENST00000522639 360 ntTSL 5 BASIC16.81■□□□□ 0.28
ATP2A2P16615 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC16.81■□□□□ 0.28
ATP2A2P16615 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC16.81■□□□□ 0.28
ATP2A2P16615 FADS2-215ENST00000574708 385 ntTSL 3 BASIC16.81■□□□□ 0.28
ATP2A2P16615 AC097724.1-201ENST00000609581 426 ntBASIC16.81■□□□□ 0.28
ATP2A2P16615 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP2A2P16615 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.81■□□□□ 0.28
ATP2A2P16615 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP2A2P16615 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.81■□□□□ 0.28
ATP2A2P16615 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.81■□□□□ 0.28
ATP2A2P16615 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP2A2P16615 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.81■□□□□ 0.28
ATP2A2P16615 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP2A2P16615 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP2A2P16615 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.81■□□□□ 0.28
ATP2A2P16615 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ATP2A2P16615 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP2A2P16615 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms