Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H1DP16402 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H1DP16402 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H1DP16402 CETN4P-206ENST00000642099 2168 ntBASIC12.91□□□□□ -0.34
HIST1H1DP16402 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H1DP16402 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H1DP16402 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
HIST1H1DP16402 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H1DP16402 PPP1R26P4-201ENST00000619065 3527 ntBASIC12.91□□□□□ -0.34
HIST1H1DP16402 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H1DP16402 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H1DP16402 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H1DP16402 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
HIST1H1DP16402 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H1DP16402 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H1DP16402 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H1DP16402 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H1DP16402 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC12.91□□□□□ -0.34
HIST1H1DP16402 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H1DP16402 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC12.91□□□□□ -0.34
HIST1H1DP16402 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H1DP16402 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC12.91□□□□□ -0.34
HIST1H1DP16402 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H1DP16402 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H1DP16402 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H1DP16402 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H1DP16402 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H1DP16402 MIR940-201ENST00000401276 94 ntBASIC12.91□□□□□ -0.34
HIST1H1DP16402 TOMM22P5-201ENST00000416399 439 ntBASIC12.91□□□□□ -0.34
HIST1H1DP16402 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC12.91□□□□□ -0.34
HIST1H1DP16402 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC12.91□□□□□ -0.34
HIST1H1DP16402 RPP21-221ENST00000428040 594 ntTSL 2 BASIC12.91□□□□□ -0.34
HIST1H1DP16402 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC12.91□□□□□ -0.34
HIST1H1DP16402 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC12.91□□□□□ -0.34
HIST1H1DP16402 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
HIST1H1DP16402 AC022447.6-201ENST00000515522 438 ntBASIC12.91□□□□□ -0.34
HIST1H1DP16402 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC12.91□□□□□ -0.34
HIST1H1DP16402 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
HIST1H1DP16402 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC12.91□□□□□ -0.34
HIST1H1DP16402 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H1DP16402 AC093520.2-201ENST00000561830 333 ntBASIC12.91□□□□□ -0.34
HIST1H1DP16402 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC12.91□□□□□ -0.34
HIST1H1DP16402 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC12.91□□□□□ -0.34
HIST1H1DP16402 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC12.91□□□□□ -0.34
HIST1H1DP16402 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC12.91□□□□□ -0.34
HIST1H1DP16402 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
HIST1H1DP16402 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H1DP16402 AC011474.4-201ENST00000623523 2076 ntBASIC12.91□□□□□ -0.34
HIST1H1DP16402 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H1DP16402 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H1DP16402 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H1DP16402 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H1DP16402 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC12.91□□□□□ -0.34
HIST1H1DP16402 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H1DP16402 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H1DP16402 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H1DP16402 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC12.91□□□□□ -0.34
HIST1H1DP16402 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H1DP16402 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC12.91□□□□□ -0.34
HIST1H1DP16402 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H1DP16402 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H1DP16402 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H1DP16402 PES1-204ENST00000402284 2144 ntTSL 5 BASIC12.91□□□□□ -0.34
HIST1H1DP16402 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H1DP16402 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H1DP16402 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H1DP16402 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC12.91□□□□□ -0.34
HIST1H1DP16402 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H1DP16402 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H1DP16402 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
HIST1H1DP16402 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC12.9□□□□□ -0.34
HIST1H1DP16402 NIN-202ENST00000324330 4364 ntTSL 5 BASIC12.9□□□□□ -0.34
HIST1H1DP16402 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H1DP16402 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H1DP16402 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H1DP16402 AL360270.3-201ENST00000609118 1348 ntBASIC12.9□□□□□ -0.34
HIST1H1DP16402 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H1DP16402 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H1DP16402 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H1DP16402 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
HIST1H1DP16402 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H1DP16402 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H1DP16402 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC12.9□□□□□ -0.34
HIST1H1DP16402 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
HIST1H1DP16402 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H1DP16402 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H1DP16402 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H1DP16402 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC12.9□□□□□ -0.34
HIST1H1DP16402 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H1DP16402 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
HIST1H1DP16402 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H1DP16402 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC12.9□□□□□ -0.34
HIST1H1DP16402 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
HIST1H1DP16402 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H1DP16402 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H1DP16402 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H1DP16402 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H1DP16402 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
HIST1H1DP16402 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H1DP16402 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms