Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC13.61□□□□□ -0.23
CDRT1O95170 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CDRT1O95170 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CDRT1O95170 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDRT1O95170 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CDRT1O95170 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDRT1O95170 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDRT1O95170 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDRT1O95170 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC13.61□□□□□ -0.23
CDRT1O95170 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDRT1O95170 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CDRT1O95170 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC13.61□□□□□ -0.23
CDRT1O95170 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDRT1O95170 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CDRT1O95170 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDRT1O95170 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CDRT1O95170 ELP6-209ENST00000446787 894 ntTSL 3 BASIC13.61□□□□□ -0.23
CDRT1O95170 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC13.61□□□□□ -0.23
CDRT1O95170 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC13.61□□□□□ -0.23
CDRT1O95170 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC13.61□□□□□ -0.23
CDRT1O95170 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC13.61□□□□□ -0.23
CDRT1O95170 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.61□□□□□ -0.23
CDRT1O95170 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC13.61□□□□□ -0.23
CDRT1O95170 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC13.61□□□□□ -0.23
CDRT1O95170 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CDRT1O95170 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CDRT1O95170 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
CDRT1O95170 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDRT1O95170 CYP4F24P-201ENST00000586049 1580 ntBASIC13.61□□□□□ -0.23
CDRT1O95170 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDRT1O95170 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CDRT1O95170 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CDRT1O95170 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDRT1O95170 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CDRT1O95170 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDRT1O95170 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDRT1O95170 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
CDRT1O95170 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.61□□□□□ -0.23
CDRT1O95170 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CDRT1O95170 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CDRT1O95170 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CDRT1O95170 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CDRT1O95170 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.61□□□□□ -0.23
CDRT1O95170 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
CDRT1O95170 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.6□□□□□ -0.23
CDRT1O95170 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDRT1O95170 AC055811.4-201ENST00000624039 1754 ntBASIC13.6□□□□□ -0.23
CDRT1O95170 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CDRT1O95170 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDRT1O95170 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CDRT1O95170 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CDRT1O95170 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CDRT1O95170 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CDRT1O95170 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDRT1O95170 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CDRT1O95170 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDRT1O95170 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDRT1O95170 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CDRT1O95170 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.6□□□□□ -0.23
CDRT1O95170 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CDRT1O95170 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDRT1O95170 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.6□□□□□ -0.23
CDRT1O95170 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.6□□□□□ -0.23
CDRT1O95170 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDRT1O95170 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CDRT1O95170 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDRT1O95170 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CDRT1O95170 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
CDRT1O95170 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC13.6□□□□□ -0.23
CDRT1O95170 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC13.6□□□□□ -0.23
CDRT1O95170 AL671277.1-201ENST00000429656 993 ntBASIC13.6□□□□□ -0.23
CDRT1O95170 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.6□□□□□ -0.23
CDRT1O95170 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CDRT1O95170 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC13.6□□□□□ -0.23
CDRT1O95170 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC13.6□□□□□ -0.23
CDRT1O95170 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.6□□□□□ -0.23
CDRT1O95170 RNA5SP416-201ENST00000516838 111 ntBASIC13.6□□□□□ -0.23
CDRT1O95170 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC13.6□□□□□ -0.23
CDRT1O95170 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC13.6□□□□□ -0.23
CDRT1O95170 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CDRT1O95170 AL135744.1-201ENST00000565098 629 ntBASIC13.6□□□□□ -0.23
CDRT1O95170 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC13.6□□□□□ -0.23
CDRT1O95170 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC13.6□□□□□ -0.23
CDRT1O95170 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.6□□□□□ -0.23
CDRT1O95170 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.6□□□□□ -0.23
CDRT1O95170 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
CDRT1O95170 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.6□□□□□ -0.23
CDRT1O95170 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDRT1O95170 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CDRT1O95170 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDRT1O95170 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDRT1O95170 AL356585.2-201ENST00000625078 2396 ntBASIC13.6□□□□□ -0.23
CDRT1O95170 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDRT1O95170 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDRT1O95170 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDRT1O95170 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.6□□□□□ -0.23
CDRT1O95170 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CDRT1O95170 AKAP8P1-201ENST00000434743 1349 ntBASIC13.6□□□□□ -0.23
CDRT1O95170 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC13.6□□□□□ -0.23
CDRT1O95170 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms