Protein–RNA interactions for Protein: O75871

CEACAM4, Carcinoembryonic antigen-related cell adhesion molecule 4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM4O75871 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CEACAM4O75871 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CEACAM4O75871 ZBED1P1-201ENST00000502364 1930 ntBASIC13.6□□□□□ -0.23
CEACAM4O75871 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CEACAM4O75871 BANP-204ENST00000393208 2283 ntTSL 2 BASIC13.6□□□□□ -0.23
CEACAM4O75871 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CEACAM4O75871 AC144522.1-201ENST00000625111 1658 ntBASIC13.59□□□□□ -0.23
CEACAM4O75871 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CEACAM4O75871 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CEACAM4O75871 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC13.59□□□□□ -0.23
CEACAM4O75871 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC13.59□□□□□ -0.23
CEACAM4O75871 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CEACAM4O75871 AL139384.1-201ENST00000612143 3047 ntBASIC13.59□□□□□ -0.23
CEACAM4O75871 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CEACAM4O75871 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CEACAM4O75871 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC13.59□□□□□ -0.23
CEACAM4O75871 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.59□□□□□ -0.23
CEACAM4O75871 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CEACAM4O75871 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.59□□□□□ -0.23
CEACAM4O75871 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CEACAM4O75871 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CEACAM4O75871 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC13.59□□□□□ -0.23
CEACAM4O75871 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.59□□□□□ -0.23
CEACAM4O75871 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CEACAM4O75871 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CEACAM4O75871 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CEACAM4O75871 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CEACAM4O75871 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CEACAM4O75871 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CEACAM4O75871 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CEACAM4O75871 AL627231.1-201ENST00000394467 1125 ntBASIC13.59□□□□□ -0.23
CEACAM4O75871 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CEACAM4O75871 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC13.59□□□□□ -0.23
CEACAM4O75871 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC13.59□□□□□ -0.23
CEACAM4O75871 RN7SL67P-201ENST00000492147 296 ntBASIC13.59□□□□□ -0.23
CEACAM4O75871 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC13.59□□□□□ -0.23
CEACAM4O75871 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CEACAM4O75871 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CEACAM4O75871 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC13.59□□□□□ -0.23
CEACAM4O75871 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC13.59□□□□□ -0.23
CEACAM4O75871 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC13.59□□□□□ -0.23
CEACAM4O75871 AC103810.10-201ENST00000606504 343 ntBASIC13.59□□□□□ -0.23
CEACAM4O75871 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC13.59□□□□□ -0.23
CEACAM4O75871 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC13.59□□□□□ -0.23
CEACAM4O75871 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC13.59□□□□□ -0.23
CEACAM4O75871 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC13.59□□□□□ -0.23
CEACAM4O75871 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CEACAM4O75871 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC13.59□□□□□ -0.23
CEACAM4O75871 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CEACAM4O75871 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC13.59□□□□□ -0.23
CEACAM4O75871 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CEACAM4O75871 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC13.59□□□□□ -0.23
CEACAM4O75871 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CEACAM4O75871 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC13.59□□□□□ -0.23
CEACAM4O75871 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CEACAM4O75871 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CEACAM4O75871 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CEACAM4O75871 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
CEACAM4O75871 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.59□□□□□ -0.23
CEACAM4O75871 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CEACAM4O75871 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CEACAM4O75871 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC13.59□□□□□ -0.23
CEACAM4O75871 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CEACAM4O75871 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CEACAM4O75871 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CEACAM4O75871 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.59□□□□□ -0.23
CEACAM4O75871 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
CEACAM4O75871 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.58□□□□□ -0.23
CEACAM4O75871 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CEACAM4O75871 AC023090.2-201ENST00000625182 2110 ntBASIC13.58□□□□□ -0.23
CEACAM4O75871 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC13.58□□□□□ -0.23
CEACAM4O75871 SALL4P5-201ENST00000419001 1760 ntBASIC13.58□□□□□ -0.23
CEACAM4O75871 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CEACAM4O75871 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CEACAM4O75871 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CEACAM4O75871 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CEACAM4O75871 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.58□□□□□ -0.24
CEACAM4O75871 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
CEACAM4O75871 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CEACAM4O75871 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CEACAM4O75871 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CEACAM4O75871 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CEACAM4O75871 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CEACAM4O75871 RPSAP31-201ENST00000416648 895 ntBASIC13.58□□□□□ -0.24
CEACAM4O75871 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC13.58□□□□□ -0.24
CEACAM4O75871 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC13.58□□□□□ -0.24
CEACAM4O75871 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CEACAM4O75871 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
CEACAM4O75871 HPN-206ENST00000597419 1212 ntTSL 5 BASIC13.58□□□□□ -0.24
CEACAM4O75871 MEG3_2.1-201ENST00000611456 105 ntBASIC13.58□□□□□ -0.24
CEACAM4O75871 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CEACAM4O75871 AC133540.1-201ENST00000620845 1019 ntBASIC13.58□□□□□ -0.24
CEACAM4O75871 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC13.58□□□□□ -0.24
CEACAM4O75871 AL805961.1-201ENST00000642026 753 ntBASIC13.58□□□□□ -0.24
CEACAM4O75871 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CEACAM4O75871 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CEACAM4O75871 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.58□□□□□ -0.24
CEACAM4O75871 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CEACAM4O75871 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC13.58□□□□□ -0.24
CEACAM4O75871 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms