Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.89□□□□□ -0.19
RNF13O43567 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
RNF13O43567 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.89□□□□□ -0.19
RNF13O43567 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RNF13O43567 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF13O43567 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.89□□□□□ -0.19
RNF13O43567 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.89□□□□□ -0.19
RNF13O43567 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.88□□□□□ -0.19
RNF13O43567 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF13O43567 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF13O43567 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.88□□□□□ -0.19
RNF13O43567 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF13O43567 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF13O43567 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.88□□□□□ -0.19
RNF13O43567 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF13O43567 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
RNF13O43567 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF13O43567 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF13O43567 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF13O43567 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF13O43567 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF13O43567 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF13O43567 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.88□□□□□ -0.19
RNF13O43567 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF13O43567 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
RNF13O43567 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.88□□□□□ -0.19
RNF13O43567 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF13O43567 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.88□□□□□ -0.19
RNF13O43567 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.88□□□□□ -0.19
RNF13O43567 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RNF13O43567 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.88□□□□□ -0.19
RNF13O43567 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RNF13O43567 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
RNF13O43567 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RNF13O43567 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC13.88□□□□□ -0.19
RNF13O43567 BASP1P1-201ENST00000430708 665 ntBASIC13.88□□□□□ -0.19
RNF13O43567 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.88□□□□□ -0.19
RNF13O43567 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.88□□□□□ -0.19
RNF13O43567 MEIS3P1-201ENST00000495167 958 ntBASIC13.88□□□□□ -0.19
RNF13O43567 AC092337.1-201ENST00000568699 1129 ntBASIC13.88□□□□□ -0.19
RNF13O43567 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.88□□□□□ -0.19
RNF13O43567 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
RNF13O43567 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.88□□□□□ -0.19
RNF13O43567 ACE3P-201ENST00000423435 1973 ntBASIC13.88□□□□□ -0.19
RNF13O43567 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
RNF13O43567 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF13O43567 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF13O43567 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF13O43567 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF13O43567 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.88□□□□□ -0.19
RNF13O43567 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.88□□□□□ -0.19
RNF13O43567 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RNF13O43567 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF13O43567 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.88□□□□□ -0.19
RNF13O43567 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF13O43567 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF13O43567 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF13O43567 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
RNF13O43567 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF13O43567 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF13O43567 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.88□□□□□ -0.19
RNF13O43567 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
RNF13O43567 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RNF13O43567 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
RNF13O43567 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF13O43567 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC13.88□□□□□ -0.19
RNF13O43567 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF13O43567 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF13O43567 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF13O43567 AC022144.1-201ENST00000602255 1580 ntBASIC13.88□□□□□ -0.19
RNF13O43567 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.87□□□□□ -0.19
RNF13O43567 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RNF13O43567 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
RNF13O43567 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RNF13O43567 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.87□□□□□ -0.19
RNF13O43567 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RNF13O43567 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.87□□□□□ -0.19
RNF13O43567 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RNF13O43567 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RNF13O43567 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.87□□□□□ -0.19
RNF13O43567 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RNF13O43567 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
RNF13O43567 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RNF13O43567 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
RNF13O43567 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RNF13O43567 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.87□□□□□ -0.19
RNF13O43567 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RNF13O43567 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RNF13O43567 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RNF13O43567 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC13.87□□□□□ -0.19
RNF13O43567 AC093214.1-201ENST00000511688 1107 ntBASIC13.87□□□□□ -0.19
RNF13O43567 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC13.87□□□□□ -0.19
RNF13O43567 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.87□□□□□ -0.19
RNF13O43567 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC13.87□□□□□ -0.19
RNF13O43567 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RNF13O43567 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.87□□□□□ -0.19
RNF13O43567 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.87□□□□□ -0.19
RNF13O43567 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RNF13O43567 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.87□□□□□ -0.19
RNF13O43567 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms