Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC144AA2RUR9 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC21.49■■□□□ 1.03
CCDC144AA2RUR9 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC21.49■■□□□ 1.03
CCDC144AA2RUR9 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC144AA2RUR9 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC144AA2RUR9 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
CCDC144AA2RUR9 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
CCDC144AA2RUR9 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC144AA2RUR9 AC132872.4-202ENST00000622924 2756 ntBASIC21.48■■□□□ 1.03
CCDC144AA2RUR9 AC091951.1-201ENST00000512854 2465 ntBASIC21.48■■□□□ 1.03
CCDC144AA2RUR9 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC144AA2RUR9 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
CCDC144AA2RUR9 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
CCDC144AA2RUR9 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC144AA2RUR9 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC144AA2RUR9 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC144AA2RUR9 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC144AA2RUR9 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC144AA2RUR9 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
CCDC144AA2RUR9 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
CCDC144AA2RUR9 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC144AA2RUR9 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC21.48■■□□□ 1.03
CCDC144AA2RUR9 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC21.48■■□□□ 1.03
CCDC144AA2RUR9 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC21.48■■□□□ 1.03
CCDC144AA2RUR9 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC21.48■■□□□ 1.03
CCDC144AA2RUR9 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC21.48■■□□□ 1.03
CCDC144AA2RUR9 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC21.48■■□□□ 1.03
CCDC144AA2RUR9 AC008805.1-201ENST00000590892 364 ntBASIC21.48■■□□□ 1.03
CCDC144AA2RUR9 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC21.48■■□□□ 1.03
CCDC144AA2RUR9 AC016629.1-201ENST00000596579 586 ntBASIC21.48■■□□□ 1.03
CCDC144AA2RUR9 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC144AA2RUR9 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
CCDC144AA2RUR9 API5-203ENST00000455725 2257 ntTSL 2 BASIC21.48■■□□□ 1.03
CCDC144AA2RUR9 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC21.48■■□□□ 1.03
CCDC144AA2RUR9 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC21.48■■□□□ 1.03
CCDC144AA2RUR9 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC21.48■■□□□ 1.03
CCDC144AA2RUR9 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC144AA2RUR9 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC21.48■■□□□ 1.03
CCDC144AA2RUR9 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC144AA2RUR9 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC21.48■■□□□ 1.03
CCDC144AA2RUR9 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC144AA2RUR9 KRT8P19-201ENST00000551916 1455 ntBASIC21.48■■□□□ 1.03
CCDC144AA2RUR9 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC144AA2RUR9 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC21.48■■□□□ 1.03
CCDC144AA2RUR9 AC008741.2-201ENST00000612792 3115 ntBASIC21.48■■□□□ 1.03
CCDC144AA2RUR9 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC144AA2RUR9 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
CCDC144AA2RUR9 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC144AA2RUR9 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC21.47■■□□□ 1.03
CCDC144AA2RUR9 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC144AA2RUR9 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC144AA2RUR9 FXNP2-201ENST00000411625 547 ntBASIC21.47■■□□□ 1.03
CCDC144AA2RUR9 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC21.47■■□□□ 1.03
CCDC144AA2RUR9 AC245884.6-201ENST00000515672 1067 ntBASIC21.47■■□□□ 1.03
CCDC144AA2RUR9 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC21.47■■□□□ 1.03
CCDC144AA2RUR9 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC21.47■■□□□ 1.03
CCDC144AA2RUR9 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC21.47■■□□□ 1.03
CCDC144AA2RUR9 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC21.47■■□□□ 1.03
CCDC144AA2RUR9 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC21.47■■□□□ 1.03
CCDC144AA2RUR9 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC144AA2RUR9 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC144AA2RUR9 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC144AA2RUR9 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC144AA2RUR9 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC144AA2RUR9 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC144AA2RUR9 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC144AA2RUR9 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
CCDC144AA2RUR9 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC144AA2RUR9 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC21.47■■□□□ 1.03
CCDC144AA2RUR9 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC144AA2RUR9 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC144AA2RUR9 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC144AA2RUR9 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC21.47■■□□□ 1.03
CCDC144AA2RUR9 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC21.46■■□□□ 1.03
CCDC144AA2RUR9 PTPA-215ENST00000432124 567 ntTSL 4 BASIC21.46■■□□□ 1.03
CCDC144AA2RUR9 MSRA-203ENST00000441698 788 ntTSL 2 BASIC21.46■■□□□ 1.03
CCDC144AA2RUR9 AC006122.1-201ENST00000493323 440 ntBASIC21.46■■□□□ 1.03
CCDC144AA2RUR9 NUP210P1-202ENST00000504322 710 ntBASIC21.46■■□□□ 1.03
CCDC144AA2RUR9 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC21.46■■□□□ 1.03
CCDC144AA2RUR9 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC21.46■■□□□ 1.03
CCDC144AA2RUR9 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC21.46■■□□□ 1.03
CCDC144AA2RUR9 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC21.46■■□□□ 1.03
CCDC144AA2RUR9 CU633904.3-201ENST00000624042 1029 ntBASIC21.46■■□□□ 1.03
CCDC144AA2RUR9 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC144AA2RUR9 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC21.46■■□□□ 1.03
CCDC144AA2RUR9 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC144AA2RUR9 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
CCDC144AA2RUR9 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC21.46■■□□□ 1.03
CCDC144AA2RUR9 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC21.46■■□□□ 1.03
CCDC144AA2RUR9 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC21.46■■□□□ 1.03
CCDC144AA2RUR9 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC144AA2RUR9 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC144AA2RUR9 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC144AA2RUR9 AMT-204ENST00000427987 1646 ntTSL 5 BASIC21.46■■□□□ 1.03
CCDC144AA2RUR9 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC144AA2RUR9 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC144AA2RUR9 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC144AA2RUR9 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC21.46■■□□□ 1.03
CCDC144AA2RUR9 AC013268.4-201ENST00000637413 2228 ntBASIC21.46■■□□□ 1.03
CCDC144AA2RUR9 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms