Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 FAM86LP-201ENST00000478302 853 ntBASIC12.27□□□□□ -0.45
TCRBV4S1A1TA0A5B7 RPL13AP25-201ENST00000484130 612 ntBASIC12.27□□□□□ -0.45
TCRBV4S1A1TA0A5B7 GLI4-203ENST00000517468 963 ntTSL 5 BASIC12.27□□□□□ -0.45
TCRBV4S1A1TA0A5B7 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC12.27□□□□□ -0.45
TCRBV4S1A1TA0A5B7 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC12.27□□□□□ -0.45
TCRBV4S1A1TA0A5B7 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
TCRBV4S1A1TA0A5B7 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
TCRBV4S1A1TA0A5B7 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC12.27□□□□□ -0.45
TCRBV4S1A1TA0A5B7 MIR6752-201ENST00000618442 71 ntBASIC12.27□□□□□ -0.45
TCRBV4S1A1TA0A5B7 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC12.27□□□□□ -0.45
TCRBV4S1A1TA0A5B7 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC12.27□□□□□ -0.45
TCRBV4S1A1TA0A5B7 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
TCRBV4S1A1TA0A5B7 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC12.27□□□□□ -0.45
TCRBV4S1A1TA0A5B7 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
TCRBV4S1A1TA0A5B7 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
TCRBV4S1A1TA0A5B7 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
TCRBV4S1A1TA0A5B7 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TCRBV4S1A1TA0A5B7 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TCRBV4S1A1TA0A5B7 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TCRBV4S1A1TA0A5B7 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
TCRBV4S1A1TA0A5B7 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TCRBV4S1A1TA0A5B7 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TCRBV4S1A1TA0A5B7 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
TCRBV4S1A1TA0A5B7 KRT8P22-201ENST00000562317 1415 ntBASIC12.27□□□□□ -0.45
TCRBV4S1A1TA0A5B7 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
TCRBV4S1A1TA0A5B7 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
TCRBV4S1A1TA0A5B7 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
TCRBV4S1A1TA0A5B7 AJ011931.1-201ENST00000618749 2492 ntBASIC12.27□□□□□ -0.45
TCRBV4S1A1TA0A5B7 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
TCRBV4S1A1TA0A5B7 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
TCRBV4S1A1TA0A5B7 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TCRBV4S1A1TA0A5B7 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC12.26□□□□□ -0.45
TCRBV4S1A1TA0A5B7 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TCRBV4S1A1TA0A5B7 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
TCRBV4S1A1TA0A5B7 AC026748.1-201ENST00000624349 3251 ntBASIC12.26□□□□□ -0.45
TCRBV4S1A1TA0A5B7 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TCRBV4S1A1TA0A5B7 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TCRBV4S1A1TA0A5B7 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC12.26□□□□□ -0.45
TCRBV4S1A1TA0A5B7 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TCRBV4S1A1TA0A5B7 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
TCRBV4S1A1TA0A5B7 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC12.26□□□□□ -0.45
TCRBV4S1A1TA0A5B7 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TCRBV4S1A1TA0A5B7 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TCRBV4S1A1TA0A5B7 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TCRBV4S1A1TA0A5B7 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC12.26□□□□□ -0.45
TCRBV4S1A1TA0A5B7 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
TCRBV4S1A1TA0A5B7 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
TCRBV4S1A1TA0A5B7 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TCRBV4S1A1TA0A5B7 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC12.26□□□□□ -0.45
TCRBV4S1A1TA0A5B7 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
TCRBV4S1A1TA0A5B7 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TCRBV4S1A1TA0A5B7 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC12.26□□□□□ -0.45
TCRBV4S1A1TA0A5B7 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TCRBV4S1A1TA0A5B7 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
TCRBV4S1A1TA0A5B7 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
TCRBV4S1A1TA0A5B7 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TCRBV4S1A1TA0A5B7 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
TCRBV4S1A1TA0A5B7 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TCRBV4S1A1TA0A5B7 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TCRBV4S1A1TA0A5B7 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
TCRBV4S1A1TA0A5B7 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TCRBV4S1A1TA0A5B7 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
TCRBV4S1A1TA0A5B7 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TCRBV4S1A1TA0A5B7 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC12.26□□□□□ -0.45
TCRBV4S1A1TA0A5B7 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC12.26□□□□□ -0.45
TCRBV4S1A1TA0A5B7 AL162726.2-201ENST00000438986 1017 ntBASIC12.26□□□□□ -0.45
TCRBV4S1A1TA0A5B7 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC12.26□□□□□ -0.45
TCRBV4S1A1TA0A5B7 AC234783.1-201ENST00000441761 496 ntBASIC12.26□□□□□ -0.45
TCRBV4S1A1TA0A5B7 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC12.26□□□□□ -0.45
TCRBV4S1A1TA0A5B7 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC12.26□□□□□ -0.45
TCRBV4S1A1TA0A5B7 LINC00552-201ENST00000625151 2579 ntBASIC12.26□□□□□ -0.45
TCRBV4S1A1TA0A5B7 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TCRBV4S1A1TA0A5B7 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
TCRBV4S1A1TA0A5B7 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
TCRBV4S1A1TA0A5B7 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TCRBV4S1A1TA0A5B7 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TCRBV4S1A1TA0A5B7 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC12.26□□□□□ -0.45
TCRBV4S1A1TA0A5B7 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TCRBV4S1A1TA0A5B7 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC12.26□□□□□ -0.45
TCRBV4S1A1TA0A5B7 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
TCRBV4S1A1TA0A5B7 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
TCRBV4S1A1TA0A5B7 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
TCRBV4S1A1TA0A5B7 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
TCRBV4S1A1TA0A5B7 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC12.26□□□□□ -0.45
TCRBV4S1A1TA0A5B7 KCP-203ENST00000610776 5108 ntTSL 5 BASIC12.26□□□□□ -0.45
TCRBV4S1A1TA0A5B7 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TCRBV4S1A1TA0A5B7 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
TCRBV4S1A1TA0A5B7 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC12.26□□□□□ -0.45
TCRBV4S1A1TA0A5B7 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC12.26□□□□□ -0.45
TCRBV4S1A1TA0A5B7 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TCRBV4S1A1TA0A5B7 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC12.26□□□□□ -0.45
TCRBV4S1A1TA0A5B7 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
TCRBV4S1A1TA0A5B7 AL607033.1-201ENST00000623900 1599 ntBASIC12.26□□□□□ -0.45
TCRBV4S1A1TA0A5B7 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TCRBV4S1A1TA0A5B7 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TCRBV4S1A1TA0A5B7 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TCRBV4S1A1TA0A5B7 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TCRBV4S1A1TA0A5B7 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms