Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 RNA5-8SN5-202ENST00000612463 153 ntBASIC11.52□□□□□ -0.57
HLA-DRB4X5D2U9 AC009118.2-201ENST00000613275 655 ntBASIC11.52□□□□□ -0.57
HLA-DRB4X5D2U9 RNA5-8SN4-201ENST00000613359 153 ntBASIC11.52□□□□□ -0.57
HLA-DRB4X5D2U9 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC11.52□□□□□ -0.57
HLA-DRB4X5D2U9 RNA5-8SN5-201ENST00000619471 153 ntBASIC11.52□□□□□ -0.57
HLA-DRB4X5D2U9 AC015656.1-201ENST00000624209 3578 ntBASIC11.52□□□□□ -0.57
HLA-DRB4X5D2U9 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
HLA-DRB4X5D2U9 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
HLA-DRB4X5D2U9 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
HLA-DRB4X5D2U9 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
HLA-DRB4X5D2U9 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
HLA-DRB4X5D2U9 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC11.52□□□□□ -0.57
HLA-DRB4X5D2U9 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
HLA-DRB4X5D2U9 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
HLA-DRB4X5D2U9 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC11.52□□□□□ -0.57
HLA-DRB4X5D2U9 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
HLA-DRB4X5D2U9 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
HLA-DRB4X5D2U9 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
HLA-DRB4X5D2U9 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
HLA-DRB4X5D2U9 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
HLA-DRB4X5D2U9 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC11.52□□□□□ -0.57
HLA-DRB4X5D2U9 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
HLA-DRB4X5D2U9 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
HLA-DRB4X5D2U9 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
HLA-DRB4X5D2U9 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
HLA-DRB4X5D2U9 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC11.51□□□□□ -0.57
HLA-DRB4X5D2U9 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
HLA-DRB4X5D2U9 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
HLA-DRB4X5D2U9 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
HLA-DRB4X5D2U9 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
HLA-DRB4X5D2U9 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
HLA-DRB4X5D2U9 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
HLA-DRB4X5D2U9 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC11.51□□□□□ -0.57
HLA-DRB4X5D2U9 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC11.51□□□□□ -0.57
HLA-DRB4X5D2U9 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
HLA-DRB4X5D2U9 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
HLA-DRB4X5D2U9 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
HLA-DRB4X5D2U9 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC11.51□□□□□ -0.57
HLA-DRB4X5D2U9 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
HLA-DRB4X5D2U9 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC11.51□□□□□ -0.57
HLA-DRB4X5D2U9 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC11.51□□□□□ -0.57
HLA-DRB4X5D2U9 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC11.51□□□□□ -0.57
HLA-DRB4X5D2U9 SYS1-203ENST00000414310 795 ntTSL 3 BASIC11.51□□□□□ -0.57
HLA-DRB4X5D2U9 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC11.51□□□□□ -0.57
HLA-DRB4X5D2U9 MEP1AP4-201ENST00000423244 1087 ntBASIC11.51□□□□□ -0.57
HLA-DRB4X5D2U9 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC11.51□□□□□ -0.57
HLA-DRB4X5D2U9 RHOA-206ENST00000454011 889 ntTSL 2 BASIC11.51□□□□□ -0.57
HLA-DRB4X5D2U9 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC11.51□□□□□ -0.57
HLA-DRB4X5D2U9 DOC2GP-202ENST00000514950 1163 ntBASIC11.51□□□□□ -0.57
HLA-DRB4X5D2U9 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC11.51□□□□□ -0.57
HLA-DRB4X5D2U9 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC11.51□□□□□ -0.57
HLA-DRB4X5D2U9 TPRX2P-201ENST00000535362 881 ntBASIC11.51□□□□□ -0.57
HLA-DRB4X5D2U9 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
HLA-DRB4X5D2U9 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC11.51□□□□□ -0.57
HLA-DRB4X5D2U9 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
HLA-DRB4X5D2U9 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC11.51□□□□□ -0.57
HLA-DRB4X5D2U9 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC11.51□□□□□ -0.57
HLA-DRB4X5D2U9 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
HLA-DRB4X5D2U9 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
HLA-DRB4X5D2U9 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC11.51□□□□□ -0.57
HLA-DRB4X5D2U9 AC025181.2-201ENST00000606994 802 ntBASIC11.51□□□□□ -0.57
HLA-DRB4X5D2U9 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
HLA-DRB4X5D2U9 GPR39-203ENST00000622084 900 ntTSL 5 BASIC11.51□□□□□ -0.57
HLA-DRB4X5D2U9 AL645728.2-202ENST00000641679 227 ntBASIC11.51□□□□□ -0.57
HLA-DRB4X5D2U9 PARN-202ENST00000420015 2360 ntTSL 2 BASIC11.51□□□□□ -0.57
HLA-DRB4X5D2U9 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
HLA-DRB4X5D2U9 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC11.51□□□□□ -0.57
HLA-DRB4X5D2U9 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
HLA-DRB4X5D2U9 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
HLA-DRB4X5D2U9 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC11.51□□□□□ -0.57
HLA-DRB4X5D2U9 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
HLA-DRB4X5D2U9 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
HLA-DRB4X5D2U9 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
HLA-DRB4X5D2U9 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
HLA-DRB4X5D2U9 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
HLA-DRB4X5D2U9 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
HLA-DRB4X5D2U9 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
HLA-DRB4X5D2U9 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
HLA-DRB4X5D2U9 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
HLA-DRB4X5D2U9 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
HLA-DRB4X5D2U9 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
HLA-DRB4X5D2U9 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
HLA-DRB4X5D2U9 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC11.5□□□□□ -0.57
HLA-DRB4X5D2U9 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
HLA-DRB4X5D2U9 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
HLA-DRB4X5D2U9 AC023024.2-201ENST00000623561 1993 ntBASIC11.5□□□□□ -0.57
HLA-DRB4X5D2U9 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
HLA-DRB4X5D2U9 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
HLA-DRB4X5D2U9 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
HLA-DRB4X5D2U9 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC11.5□□□□□ -0.57
HLA-DRB4X5D2U9 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
HLA-DRB4X5D2U9 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
HLA-DRB4X5D2U9 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC11.5□□□□□ -0.57
HLA-DRB4X5D2U9 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
HLA-DRB4X5D2U9 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
HLA-DRB4X5D2U9 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
HLA-DRB4X5D2U9 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
HLA-DRB4X5D2U9 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
HLA-DRB4X5D2U9 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
HLA-DRB4X5D2U9 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms