Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGB4Q9UN71 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.82□□□□□ -0.04
PCDHGB4Q9UN71 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.82□□□□□ -0.04
PCDHGB4Q9UN71 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.82□□□□□ -0.04
PCDHGB4Q9UN71 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.82□□□□□ -0.04
PCDHGB4Q9UN71 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
PCDHGB4Q9UN71 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
PCDHGB4Q9UN71 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGB4Q9UN71 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.82□□□□□ -0.04
PCDHGB4Q9UN71 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.82□□□□□ -0.04
PCDHGB4Q9UN71 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGB4Q9UN71 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGB4Q9UN71 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGB4Q9UN71 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.82□□□□□ -0.04
PCDHGB4Q9UN71 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.82□□□□□ -0.04
PCDHGB4Q9UN71 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGB4Q9UN71 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
PCDHGB4Q9UN71 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
PCDHGB4Q9UN71 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.82□□□□□ -0.04
PCDHGB4Q9UN71 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGB4Q9UN71 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGB4Q9UN71 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGB4Q9UN71 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGB4Q9UN71 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.82□□□□□ -0.04
PCDHGB4Q9UN71 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
PCDHGB4Q9UN71 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGB4Q9UN71 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGB4Q9UN71 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGB4Q9UN71 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.81□□□□□ -0.04
PCDHGB4Q9UN71 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGB4Q9UN71 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.81□□□□□ -0.04
PCDHGB4Q9UN71 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGB4Q9UN71 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.81□□□□□ -0.04
PCDHGB4Q9UN71 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGB4Q9UN71 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGB4Q9UN71 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.81□□□□□ -0.04
PCDHGB4Q9UN71 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGB4Q9UN71 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.81□□□□□ -0.04
PCDHGB4Q9UN71 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.81□□□□□ -0.04
PCDHGB4Q9UN71 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGB4Q9UN71 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGB4Q9UN71 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGB4Q9UN71 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGB4Q9UN71 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
PCDHGB4Q9UN71 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.81□□□□□ -0.04
PCDHGB4Q9UN71 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.81□□□□□ -0.04
PCDHGB4Q9UN71 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGB4Q9UN71 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.81□□□□□ -0.04
PCDHGB4Q9UN71 AC026150.2-201ENST00000564693 1156 ntBASIC14.81□□□□□ -0.04
PCDHGB4Q9UN71 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGB4Q9UN71 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.81□□□□□ -0.04
PCDHGB4Q9UN71 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGB4Q9UN71 MIR6069-201ENST00000620069 79 ntBASIC14.81□□□□□ -0.04
PCDHGB4Q9UN71 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.81□□□□□ -0.04
PCDHGB4Q9UN71 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGB4Q9UN71 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
PCDHGB4Q9UN71 ZBED1P1-201ENST00000502364 1930 ntBASIC14.81□□□□□ -0.04
PCDHGB4Q9UN71 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
PCDHGB4Q9UN71 KRT8P12-202ENST00000472924 1397 ntBASIC14.81□□□□□ -0.04
PCDHGB4Q9UN71 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGB4Q9UN71 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGB4Q9UN71 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
PCDHGB4Q9UN71 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
PCDHGB4Q9UN71 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGB4Q9UN71 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGB4Q9UN71 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGB4Q9UN71 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGB4Q9UN71 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
PCDHGB4Q9UN71 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGB4Q9UN71 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGB4Q9UN71 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.81□□□□□ -0.04
PCDHGB4Q9UN71 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGB4Q9UN71 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGB4Q9UN71 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGB4Q9UN71 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGB4Q9UN71 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.81□□□□□ -0.04
PCDHGB4Q9UN71 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGB4Q9UN71 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGB4Q9UN71 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.81□□□□□ -0.04
PCDHGB4Q9UN71 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGB4Q9UN71 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGB4Q9UN71 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.8□□□□□ -0.04
PCDHGB4Q9UN71 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
PCDHGB4Q9UN71 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGB4Q9UN71 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGB4Q9UN71 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGB4Q9UN71 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.8□□□□□ -0.04
PCDHGB4Q9UN71 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.8□□□□□ -0.04
PCDHGB4Q9UN71 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGB4Q9UN71 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGB4Q9UN71 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
PCDHGB4Q9UN71 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGB4Q9UN71 INTS4P1-203ENST00000641008 3683 ntBASIC14.8□□□□□ -0.04
PCDHGB4Q9UN71 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
PCDHGB4Q9UN71 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
PCDHGB4Q9UN71 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.8□□□□□ -0.04
PCDHGB4Q9UN71 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.8□□□□□ -0.04
PCDHGB4Q9UN71 BX842568.4-201ENST00000421222 227 ntBASIC14.8□□□□□ -0.04
PCDHGB4Q9UN71 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.8□□□□□ -0.04
PCDHGB4Q9UN71 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms